Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 1.6e-28 128.6 63 100.0
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 3.2e-16 87.8 80 62.5
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 3.6e-15 84.3 85 56.5
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.6e-15 84.3 79 57.0
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 3.6e-15 84.3 80 56.2
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 4.6e-15 84.0 80 56.2
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 4.6e-15 84.0 80 56.2
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 7.9e-15 83.2 78 57.7
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.0e-14 82.8 85 52.9
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.0e-14 82.8 85 52.9
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.3e-14 82.4 80 56.2
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 1.8e-14 82.0 80 55.0
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 1.8e-14 82.0 80 55.0
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 2.3e-14 81.6 82 52.4
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 3.0e-14 81.3 78 53.8
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 3.0e-14 81.3 80 53.8
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 3.0e-14 81.3 80 57.5
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 3.9e-14 80.9 80 55.0
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 5.1e-14 80.5 80 53.8
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 6.7e-14 80.1 80 55.0
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 6.7e-14 80.1 80 53.8
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 6.7e-14 80.1 80 53.8
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 6.7e-14 80.1 80 53.8
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 6.7e-14 80.1 56 67.9
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 8.7e-14 79.7 80 52.5
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 1.1e-13 79.3 80 52.5
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.1e-13 79.3 80 53.8
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 1.5e-13 79.0 78 52.6
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.5e-13 79.0 80 56.2
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.5e-13 79.0 80 50.0
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 1.5e-13 79.0 80 53.8
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 1.5e-13 79.0 77 54.5
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 1.9e-13 78.6 77 51.9
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 1.9e-13 78.6 85 52.9
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 1.9e-13 78.6 80 52.5
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 2.5e-13 78.2 80 51.2
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.5e-13 78.2 73 56.2
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 3.3e-13 77.8 78 52.6
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 3.3e-13 77.8 78 52.6
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 3.3e-13 77.8 78 51.3
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.3e-13 77.8 80 53.8
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 3.3e-13 77.8 80 53.8
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 4.3e-13 77.4 79 50.6
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 5.7e-13 77.0 86 50.0
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 5.7e-13 77.0 80 51.2
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 5.7e-13 77.0 80 51.2
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 7.4e-13 76.6 80 51.2
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 7.4e-13 76.6 79 51.9
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 7.4e-13 76.6 77 51.9
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 7.4e-13 76.6 77 53.2
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 9.7e-13 76.3 80 51.2
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 9.7e-13 76.3 80 52.5
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 9.7e-13 76.3 77 53.2
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 9.7e-13 76.3 80 50.0
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.3e-12 75.9 78 51.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.3e-12 75.9 80 53.8
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 1.3e-12 75.9 86 47.7
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 1.3e-12 75.9 80 51.2
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.3e-12 75.9 77 51.9
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 1.6e-12 75.5 78 50.0
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 50.0
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 50.0
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 52.5
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 50.0
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 50.0
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 1.6e-12 75.5 80 50.0
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.2e-12 75.1 74 55.4
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 2.2e-12 75.1 74 55.4
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.2e-12 75.1 80 52.5
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 2.2e-12 75.1 74 52.7
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 2.8e-12 74.7 77 51.9
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 2.8e-12 74.7 80 51.2
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 2.8e-12 74.7 76 53.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 4.8e-12 73.9 85 50.6
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 6.3e-12 73.6 82 50.0
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 6.3e-12 73.6 82 50.0
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 6.3e-12 73.6 80 51.2
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 8.2e-12 73.2 80 48.8
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 8.2e-12 73.2 77 50.6
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 8.2e-12 73.2 80 50.0
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.1e-11 72.8 76 52.6
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.1e-11 72.8 76 52.6
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.1e-11 72.8 76 52.6
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.1e-11 72.8 77 50.6
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.1e-11 72.8 77 50.6
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.1e-11 72.8 77 50.6
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 1.1e-11 72.8 77 50.6
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 1.1e-11 72.8 80 50.0
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 50.0
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 50.0
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 50.0
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 50.0
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 50.0
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.4e-11 72.4 77 49.4
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 1.4e-11 72.4 80 51.2
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.8e-11 72.0 75 52.0
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.8e-11 72.0 85 47.1
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 2.4e-11 71.6 75 50.7
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 2.4e-11 71.6 80 47.5
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 2.4e-11 71.6 77 49.4
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 2.4e-11 71.6 77 49.4
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.1e-11 71.2 75 50.7
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.1e-11 71.2 75 50.7
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 3.1e-11 71.2 85 47.1
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 4.1e-11 70.9 81 48.1
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 4.1e-11 70.9 80 50.0
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 5.3e-11 70.5 75 50.7
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 6.9e-11 70.1 75 50.7
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 9.1e-11 69.7 75 50.7
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.2e-10 69.3 73 49.3
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 2.6e-10 68.2 74 50.0
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.6e-10 68.2 80 47.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 3.4e-10 67.8 80 48.8
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 3.4e-10 67.8 74 51.4
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 4.5e-10 67.4 73 50.7
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 4.5e-10 67.4 74 50.0
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 7.7e-10 66.6 80 47.5
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 1.0e-09 66.2 51 60.8
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.3e-09 65.9 80 47.5
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 5.0e-09 63.9 74 47.3
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 8.5e-09 63.2 73 45.2
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 8.5e-09 63.2 73 45.2
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.4e-08 62.4 74 44.6
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.9e-08 62.0 75 44.0
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 9.4e-08 59.7 101 37.6
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 3.6e-07 57.8 35 74.3
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 1.8e-06 55.5 32 75.0
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 3.0e-06 54.7 79 38.0
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 3.0e-06 54.7 68 44.1
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 5.1e-06 53.9 30 76.7


User provided reference genes

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