Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 2.4e-48 195.3 106 100.0
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 1.1e-11 73.6 36 100.0
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.1e-11 73.6 36 100.0
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.1e-11 73.6 36 100.0
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.8e-11 70.9 37 91.9
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.8e-11 70.9 37 91.9
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 1.2e-10 70.1 37 89.2
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 2.6e-10 68.9 35 91.4
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 2.6e-10 68.9 35 91.4
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 3.4e-10 68.6 35 88.6
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 3.4e-10 68.6 35 88.6
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 4.4e-10 68.2 35 97.1
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 5.8e-10 67.8 35 94.3
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 5.8e-10 67.8 35 94.3
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.8e-10 67.8 35 85.7
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 7.6e-10 67.4 35 88.6
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 7.6e-10 67.4 36 86.1
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 9.9e-10 67.0 35 88.6
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 9.9e-10 67.0 35 88.6
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 9.9e-10 67.0 35 88.6
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 1.3e-09 66.6 37 81.1
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 1.3e-09 66.6 35 85.7
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.3e-09 66.6 35 91.4
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 1.3e-09 66.6 35 94.3
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.9e-09 65.5 35 88.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.9e-09 65.5 35 88.6
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 2.9e-09 65.5 37 75.7
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 94.3
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 3.8e-09 65.1 35 88.6
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 88.6
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 4.9e-09 64.7 37 78.4
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 4.9e-09 64.7 35 85.7
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 85.7
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 85.7
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 85.7
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 6.4e-09 64.3 35 82.9
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 8.4e-09 63.9 36 80.6
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 82.9
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 85.7
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 8.4e-09 63.9 37 81.1
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 88.6
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 88.6
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 88.6
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 8.4e-09 63.9 35 80.0
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.1e-08 63.5 35 85.7
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 1.1e-08 63.5 35 82.9
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 1.1e-08 63.5 37 78.4
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 1.1e-08 63.5 35 85.7
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 1.1e-08 63.5 37 75.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 1.1e-08 63.5 35 82.9
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.4e-08 63.2 35 85.7
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.4e-08 63.2 35 85.7
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.9e-08 62.8 37 78.4
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.9e-08 62.8 35 82.9
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 1.9e-08 62.8 35 82.9
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.9e-08 62.8 35 82.9
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 1.9e-08 62.8 34 85.3
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.2e-08 62.0 35 85.7
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 3.2e-08 62.0 35 80.0
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 4.1e-08 61.6 35 82.9
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 4.1e-08 61.6 35 82.9
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 5.4e-08 61.2 36 75.0
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 5.4e-08 61.2 37 75.7
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 5.4e-08 61.2 36 75.0
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 5.4e-08 61.2 36 75.0
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 5.4e-08 61.2 36 75.0
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 7.1e-08 60.8 37 73.0
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 7.1e-08 60.8 35 77.1
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.2e-08 60.5 35 82.9
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 9.2e-08 60.5 37 78.4
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 9.2e-08 60.5 35 80.0
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 1.2e-07 60.1 35 80.0
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.2e-07 60.1 35 82.9
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.7e-07 58.9 35 77.1
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.5e-07 58.5 35 77.1
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 4.6e-07 58.2 35 77.1
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 7.8e-07 57.4 35 77.1
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.0e-06 55.5 35 74.3
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 3.0e-06 55.5 37 67.6


User provided reference genes

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