Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 9.6e-139 496.9 263 100.0
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 3.8e-119 431.8 260 82.7
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.4e-118 429.9 260 83.5
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.5e-104 383.3 264 73.1
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 8.8e-100 367.5 262 71.0
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.7e-99 364.8 260 70.8
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 7.4e-99 364.4 260 70.8
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 3.7e-98 362.1 261 70.1
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.8e-97 359.8 259 69.9
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 9.1e-97 357.5 261 69.3
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.5e-96 356.7 261 68.6
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 3.4e-96 355.5 260 69.6
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 7.7e-96 354.4 261 67.4
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.0e-95 354.0 263 67.7
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.0e-95 354.0 260 68.1
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.0e-95 354.0 263 68.8
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 5.0e-95 351.7 261 68.2
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 1.1e-94 350.5 263 68.4
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 1.9e-94 349.7 224 75.4
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.9e-94 349.7 262 67.9
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 2.5e-94 349.4 262 67.9
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 3.2e-94 349.0 262 67.9
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 4.2e-94 348.6 261 67.8
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 5.5e-94 348.2 261 68.6
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 7.2e-94 347.8 261 67.8
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 9.4e-94 347.4 225 76.0
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 9.4e-94 347.4 262 67.6
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.7e-93 345.9 225 73.8
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 3.6e-93 345.5 261 65.9
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 7.9e-93 344.4 223 78.0
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 7.9e-93 344.4 263 68.1
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.0e-92 344.0 263 68.4
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.4e-92 343.6 224 74.6
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.4e-92 343.6 224 74.6
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 1.8e-92 343.2 259 65.6
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.0e-92 342.4 226 73.0
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 3.0e-92 342.4 264 66.7
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.9e-92 342.0 266 66.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 3.9e-92 342.0 224 74.1
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 3.9e-92 342.0 263 66.9
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 5.2e-92 341.7 263 66.9
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.2e-92 341.7 260 66.9
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 5.2e-92 341.7 260 67.7
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 6.7e-92 341.3 260 65.4
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 6.7e-92 341.3 260 65.4
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 6.7e-92 341.3 263 68.1
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 8.8e-92 340.9 223 74.4
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 1.1e-91 340.5 261 65.5
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.1e-91 340.5 223 77.1
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.0e-91 339.7 262 66.0
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 2.0e-91 339.7 223 74.0
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 5.7e-91 338.2 221 71.9
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 1.3e-90 337.0 226 72.1
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.3e-90 337.0 263 67.3
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-90 337.0 228 72.4
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.3e-90 337.0 225 72.0
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.3e-90 337.0 220 75.9
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 2.2e-90 336.3 221 74.7
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 2.8e-90 335.9 264 64.8
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 3.7e-90 335.5 224 73.7
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 3.7e-90 335.5 266 65.8
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 4.8e-90 335.1 263 65.0
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 4.8e-90 335.1 263 65.0
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 4.8e-90 335.1 264 65.2
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 4.8e-90 335.1 261 65.9
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 8.2e-90 334.3 263 65.4
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 8.2e-90 334.3 227 71.4
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 8.2e-90 334.3 227 71.4
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.1e-89 334.0 223 71.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 1.1e-89 334.0 227 71.4
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.4e-89 333.6 264 64.8
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.8e-89 333.2 223 72.2
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 2.4e-89 332.8 262 64.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 2.4e-89 332.8 262 64.9
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 2.4e-89 332.8 264 65.5
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 3.1e-89 332.4 222 76.6
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 3.1e-89 332.4 275 62.9
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.1e-89 332.0 279 63.4
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 9.1e-89 330.9 223 70.9
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.2e-88 330.5 266 65.0
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 2.0e-88 329.7 226 72.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 2.6e-88 329.3 278 62.6
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 4.5e-88 328.6 223 72.6
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 5.9e-88 328.2 223 73.5
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 3.8e-87 325.5 223 70.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 8.5e-87 324.3 250 66.0
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.1e-85 319.7 245 66.9
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 3.6e-85 318.9 216 71.8
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 4.7e-85 318.5 210 73.3
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.4e-84 317.0 268 62.7
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.8e-84 316.6 210 72.4
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.5e-83 313.5 218 68.8
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 7.5e-83 311.2 217 73.3
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.2e-82 307.8 245 64.5
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 7.7e-80 301.2 222 68.5
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 7.7e-80 301.2 225 63.6
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 2.9e-79 299.3 218 67.0
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-77 293.9 246 62.6
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.1e-77 293.1 226 66.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.3e-76 289.7 163 85.3
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.4e-75 285.8 208 69.2
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 2.2e-74 283.1 218 63.3
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.1e-73 280.8 221 63.3
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.0e-71 274.2 218 62.4
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.2e-70 268.9 214 66.8
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 7.2e-70 268.1 161 78.9
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-66 257.3 206 63.1
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.3e-66 257.3 215 63.7
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.3e-66 257.3 222 61.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 2.8e-66 256.1 250 56.0
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 2.9e-63 246.1 179 68.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 7.3e-62 241.5 173 71.7
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.7e-58 230.3 219 55.7
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.9e-58 229.6 156 70.5
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 3.7e-58 229.2 258 50.8
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 9.2e-57 224.6 259 48.3
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.1e-52 209.5 229 53.3
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.3e-50 204.1 115 81.7
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 7.8e-48 194.9 113 82.3
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.7e-47 193.7 262 45.4
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.1e-44 184.5 101 82.2
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.9e-41 173.7 267 40.8
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 2.1e-37 160.2 119 66.4
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 9.2e-33 144.8 150 54.0
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.1e-31 139.0 149 52.3
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.8e-28 130.6 65 92.3
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 6.9e-28 128.6 89 73.0
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 3.5e-24 116.3 117 59.0
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 1.5e-22 110.9 57 86.0
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.7e-18 97.4 54 77.8
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 2.4e-17 93.6 72 68.1
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.5e-11 74.3 85 48.2
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 5.8e-11 72.4 78 51.3
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.2e-10 70.5 44 72.7
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 2.9e-10 70.1 60 60.0
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 7.1e-09 65.5 40 75.0
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.3e-07 60.5 51 62.7
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 9.6e-06 55.1 41 63.4


User provided reference genes

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