Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 1.1e-237 826.2 413 100.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.6e-193 678.3 430 79.5
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 5.7e-170 601.3 441 70.1
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.9e-164 580.9 418 69.1
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.2e-153 546.2 421 66.5
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 4.1e-152 542.0 417 65.2
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 9.1e-152 540.8 419 66.6
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.6e-151 540.0 407 67.6
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.6e-151 539.3 414 66.2
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.0e-150 537.3 404 67.3
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.0e-150 537.3 407 65.1
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.3e-150 537.0 421 64.1
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 2.2e-150 536.2 428 64.7
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.8e-150 535.4 406 66.0
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 8.5e-150 534.3 413 65.1
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 5.5e-149 531.6 413 65.4
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.6e-148 530.0 408 66.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.7e-148 529.3 408 65.7
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 8.0e-148 527.7 298 86.2
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.4e-147 526.9 402 65.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.3e-147 526.2 404 65.3
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.1e-146 523.9 413 62.7
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.5e-146 523.5 417 63.8
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.6e-146 522.7 404 65.3
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.6e-146 522.7 412 62.9
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 4.4e-146 521.9 406 64.8
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.7e-146 521.5 406 63.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 9.7e-146 520.8 404 65.1
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 9.7e-146 520.8 406 65.3
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.3e-145 520.4 415 63.6
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.3e-145 520.4 407 65.4
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.3e-145 520.4 407 65.4
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.7e-145 520.0 421 61.3
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 2.2e-145 519.6 408 64.2
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.8e-145 519.2 409 63.8
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 4.8e-145 518.5 403 63.8
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.8e-145 518.5 404 64.9
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 4.8e-145 518.5 414 62.3
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 6.3e-145 518.1 411 64.2
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 6.3e-145 518.1 404 64.4
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.1e-144 517.3 422 62.3
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.1e-144 517.3 409 63.3
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 1.4e-144 516.9 405 64.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.4e-144 516.9 415 62.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.8e-144 516.5 404 64.6
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.8e-144 516.5 418 62.4
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.8e-144 516.5 407 62.7
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.4e-144 516.2 410 64.4
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 4.1e-144 515.4 412 62.9
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 4.1e-144 515.4 422 63.5
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.0e-144 514.6 452 60.2
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 9.1e-144 514.2 412 63.3
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 9.1e-144 514.2 445 60.0
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.2e-143 513.8 400 63.0
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 2.0e-143 513.1 413 63.4
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 2.0e-143 513.1 406 63.5
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 7.7e-143 511.1 409 64.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 7.7e-143 511.1 411 62.8
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.3e-142 510.4 429 60.6
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 2.9e-142 509.2 404 63.9
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.1e-141 507.3 407 63.4
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.1e-141 507.3 420 61.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.1e-141 507.3 424 60.8
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.5e-141 506.1 428 59.8
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 4.2e-141 505.4 425 59.3
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 5.5e-141 505.0 406 62.6
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 2.3e-139 499.6 432 60.9
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 3.0e-139 499.2 414 62.8
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 2.6e-138 496.1 360 68.6
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 3.4e-138 495.7 404 61.9
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 3.7e-137 492.3 480 53.3
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 8.3e-137 491.1 443 58.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.2e-135 487.3 409 61.1
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.7e-134 483.4 421 55.8
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.5e-133 480.3 403 59.1
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 5.5e-133 478.4 409 57.7
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.2e-132 477.2 352 64.2
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.6e-132 476.9 432 56.7
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.4e-131 473.8 405 57.0
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.8e-131 473.4 407 57.2
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 2.3e-131 473.0 402 57.7
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 5.2e-131 471.9 351 63.2
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 6.8e-131 471.5 405 56.8
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 6.8e-131 471.5 404 57.4
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.2e-130 470.7 440 55.7
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 5.7e-130 468.4 403 56.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 3.7e-129 465.7 402 56.5
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.4e-128 463.8 402 56.2
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 5.0e-126 455.3 437 55.8
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 8.6e-126 454.5 490 48.8
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 7.3e-125 451.4 319 68.7
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.4e-123 447.2 358 59.8
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 2.0e-122 443.4 330 65.2
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.7e-122 441.8 346 63.6
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.8e-120 436.8 346 63.0
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.6e-119 433.7 318 67.3
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 4.6e-119 432.2 432 51.2
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 6.2e-116 421.8 405 52.1
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 2.0e-114 416.8 316 65.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.4e-114 416.0 242 83.1
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-109 401.0 283 67.5
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.2e-106 391.0 395 52.4
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 8.3e-105 384.8 280 67.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.5e-101 373.2 348 54.3
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.8e-95 351.7 394 45.9
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.7e-94 350.5 290 57.6
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 2.5e-93 346.7 274 63.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 7.3e-93 345.1 348 50.6
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 2.0e-90 337.0 396 48.0
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 5.1e-86 322.4 292 55.5
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 5.3e-83 312.4 286 57.3
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 9.9e-82 308.1 289 55.4
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 5.4e-80 302.4 323 50.8
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.0e-71 272.3 216 64.8
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 8.7e-70 268.5 319 49.8
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.5e-69 266.9 255 53.3
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 2.4e-67 260.4 160 77.5
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 2.4e-67 260.4 259 49.0
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 1.4e-64 251.1 197 63.5
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.8e-52 210.3 233 45.1
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.9e-50 202.6 161 59.6
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.1e-43 181.8 144 59.0
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.6e-34 151.4 312 31.7
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 6.5e-33 146.0 115 61.7
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.9e-32 144.4 121 59.5
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 3.2e-32 143.7 107 66.4
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 7.0e-19 99.4 75 68.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 8.8e-14 82.4 200 32.0
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.4e-13 80.5 51 72.5
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 2.2e-12 77.8 57 66.7


User provided reference genes

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