Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 2.3e-189 666.4 464 100.0
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 3.7e-139 499.6 444 86.5
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 7.0e-138 495.4 444 86.0
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 4.4e-132 476.1 446 83.6
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.2e-123 447.2 532 60.9
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 6.8e-101 372.5 445 72.6
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 2.9e-99 367.1 449 72.2
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 2.7e-97 360.5 448 70.3
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 4.6e-97 359.8 447 71.1
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 6.0e-97 359.4 447 71.4
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 3.9e-96 356.7 463 68.9
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.1e-95 355.1 470 69.1
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 7.3e-95 352.4 443 70.0
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 1.2e-94 351.7 462 69.0
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.6e-94 351.3 449 70.6
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.6e-94 351.3 455 69.5
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 2.1e-94 350.9 450 68.9
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.8e-94 350.5 470 68.9
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 1.1e-93 348.6 444 69.6
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.3e-93 347.4 447 69.6
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 4.0e-93 346.7 455 69.0
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 6.8e-93 345.9 456 70.0
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 4.4e-92 343.2 432 72.0
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 7.5e-92 342.4 463 68.9
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 2.9e-91 340.5 457 68.5
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 6.4e-91 339.3 447 68.5
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.1e-90 338.6 439 68.8
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 7.1e-90 335.9 430 71.4
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 1.6e-89 334.7 441 70.3
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 2.1e-89 334.3 435 70.6
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 7.8e-89 332.4 447 68.9
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.7e-88 331.3 432 70.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.0e-88 330.5 449 67.5
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.0e-88 330.5 449 67.5
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 6.6e-88 329.3 445 69.7
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 8.6e-88 328.9 443 68.4
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 8.6e-88 328.9 444 68.7
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.1e-87 328.6 463 68.3
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.5e-87 328.2 438 68.9
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.5e-87 327.4 445 69.2
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 5.6e-87 326.2 445 69.4
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 5.6e-87 326.2 445 69.4
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 5.6e-87 326.2 434 69.8
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 5.6e-87 326.2 438 69.9
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 9.5e-87 325.5 436 69.0
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 1.2e-86 325.1 456 66.2
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.2e-86 325.1 443 68.4
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 2.8e-86 323.9 430 69.1
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.8e-86 323.9 450 68.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 3.6e-86 323.6 456 67.1
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 3.6e-86 323.6 218 73.9
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 6.2e-86 322.8 448 64.7
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 6.2e-86 322.8 449 68.8
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.4e-85 321.6 445 68.8
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 8.9e-85 318.9 440 69.5
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.2e-84 318.5 453 66.7
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 2.6e-84 317.4 405 73.3
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 3.4e-84 317.0 405 73.3
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.7e-83 314.7 436 68.3
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 2.2e-83 314.3 471 65.8
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 6.4e-83 312.8 445 65.8
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 3.2e-82 310.5 446 66.4
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 1.6e-81 308.1 418 70.1
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 6.0e-81 306.2 406 72.7
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 1.0e-80 305.4 429 70.4
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 3.0e-80 303.9 445 68.1
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 6.6e-80 302.8 453 66.7
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 9.6e-79 298.9 457 64.8
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.6e-78 297.0 439 67.2
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 4.7e-78 296.6 441 67.1
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 3.1e-77 293.9 445 66.5
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 4.0e-77 293.5 405 70.1
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.6e-76 290.8 417 69.1
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 3.4e-76 290.4 445 66.7
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 3.8e-75 287.0 407 60.4
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 4.9e-75 286.6 456 63.6
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 4.9e-75 286.6 395 72.7
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.1e-74 285.4 443 63.7
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 2.4e-74 284.3 409 70.9
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.0e-72 278.9 405 69.6
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 2.5e-71 274.2 404 69.3
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 2.8e-70 270.8 448 62.5
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 3.8e-67 260.4 396 69.4
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 4.9e-67 260.0 426 46.2
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.9e-66 258.1 410 64.9
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.2e-65 255.4 466 45.1
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 6.0e-65 253.1 387 64.3
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.8e-59 233.8 224 57.1
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 2.8e-54 217.6 191 60.7
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.1e-50 205.7 240 48.8
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.8e-48 198.4 403 60.3
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.8e-45 188.3 114 80.7
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.4e-42 178.7 113 72.6
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.9e-42 178.3 103 83.5
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 5.7e-39 166.8 114 70.2
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 1.3e-38 165.6 113 73.5
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 3.7e-38 164.1 267 80.1
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 2.9e-35 154.5 104 72.1
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 3.1e-29 134.4 408 53.7
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 9.1e-29 132.9 135 49.6
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.7e-27 128.6 76 80.3
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.1e-25 121.7 76 69.7
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.8e-24 118.6 72 76.4
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.3e-22 112.5 67 77.6
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 1.0e-16 92.8 157 38.2


User provided reference genes

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