Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 8.1e-84 313.5 142 100.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 5.6e-69 264.2 143 83.2
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.1e-67 258.5 144 80.6
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 2.6e-58 228.8 140 70.0
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 5.0e-57 224.6 136 71.3
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 4.2e-56 221.5 143 68.5
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.6e-55 219.5 144 66.0
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.6e-55 218.4 142 68.3
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.6e-55 218.0 142 67.6
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 7.9e-55 217.2 136 69.1
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.0e-54 216.9 143 66.4
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.3e-54 216.5 110 79.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 3.0e-54 215.3 140 70.7
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.9e-53 212.6 140 70.0
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 5.7e-53 211.1 133 67.7
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 5.7e-53 211.1 140 69.3
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 7.4e-53 210.7 136 68.4
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 9.7e-53 210.3 137 67.9
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 2.8e-52 208.8 143 65.7
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 2.8e-52 208.8 136 65.4
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 2.8e-52 208.8 144 63.9
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 6.3e-52 207.6 142 64.8
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 6.3e-52 207.6 142 64.8
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.1e-51 206.8 143 65.0
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.1e-51 206.8 141 64.5
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.4e-51 206.5 145 64.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.8e-51 206.1 141 66.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 3.1e-51 205.3 137 66.4
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 3.1e-51 205.3 137 66.4
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 3.1e-51 205.3 137 66.4
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 3.1e-51 205.3 137 66.4
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 3.1e-51 205.3 137 66.4
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.1e-51 204.9 140 66.4
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 4.1e-51 204.9 140 66.4
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 5.3e-51 204.5 140 66.4
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.0e-50 202.6 136 64.0
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 3.4e-50 201.8 146 63.7
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 3.4e-50 201.8 136 63.2
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 5.9e-50 201.1 141 64.5
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 7.7e-50 200.7 143 64.3
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 7.7e-50 200.7 143 64.3
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 7.7e-50 200.7 116 69.8
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.0e-49 200.3 136 63.2
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.7e-49 199.5 138 65.9
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.7e-49 199.5 136 63.2
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.7e-49 199.5 136 64.0
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.7e-49 199.5 136 62.5
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.2e-49 199.1 140 62.9
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.2e-49 199.1 110 72.7
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 65.7
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 2.9e-49 198.7 138 63.0
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.9e-49 198.7 138 63.8
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.9e-49 198.7 138 64.5
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 3.8e-49 198.4 141 63.8
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 6.5e-49 197.6 145 59.3
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 8.5e-49 197.2 136 61.8
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 8.5e-49 197.2 144 61.8
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 8.5e-49 197.2 134 64.9
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 8.5e-49 197.2 147 60.5
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.1e-48 196.8 138 63.0
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.4e-48 196.4 105 73.3
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.9e-48 196.1 136 61.8
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 61.5
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.2e-48 194.1 132 62.9
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 9.4e-48 193.7 144 59.7
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.2e-47 193.4 136 64.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.6e-47 193.0 136 61.8
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.1e-47 192.6 140 61.4
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.1e-47 192.6 139 61.2
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 3.6e-47 191.8 137 62.8
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 3.6e-47 191.8 119 69.7
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 6.1e-47 191.0 139 60.4
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 6.1e-47 191.0 95 82.1
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.0e-46 190.3 136 61.8
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.8e-46 189.5 183 49.2
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.0e-46 188.7 116 67.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 3.9e-46 188.3 137 61.3
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 5.1e-46 188.0 137 61.3
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.5e-45 186.4 135 63.7
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.5e-45 186.4 174 53.4
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 2.0e-45 186.0 110 70.0
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.7e-45 184.5 148 56.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.8e-44 181.4 142 54.9
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.4e-43 179.1 125 63.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 4.1e-43 178.3 158 55.1
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.3e-43 177.9 117 62.4
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 6.9e-43 177.6 117 62.4
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 9.1e-43 177.2 94 76.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.5e-42 176.4 137 55.5
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 4.5e-42 174.9 135 59.3
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 3.8e-41 171.8 109 63.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.0e-41 171.4 179 48.6
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.1e-39 166.0 93 83.9
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 2.1e-39 166.0 137 58.4
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.6e-39 165.2 116 62.1
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 6.1e-39 164.5 148 51.4
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.4e-38 163.3 84 77.4
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.0e-38 162.2 93 81.7
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 3.9e-38 161.8 115 66.1
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.2e-38 161.4 116 60.3
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.7e-38 161.0 118 53.4
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.5e-37 159.8 123 60.2
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.3e-37 158.7 140 53.6
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 5.7e-37 157.9 84 75.0
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.7e-36 156.4 127 57.5
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 2.2e-36 156.0 110 62.7
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.9e-33 145.6 149 50.3
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.0e-30 137.1 90 66.7
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.7e-28 129.8 90 60.0
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 5.3e-27 124.8 101 57.4
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.0e-25 120.6 99 57.6
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 95 55.8
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 95 55.8
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 2.5e-24 115.9 81 65.4
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.1e-23 112.8 98 55.1
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.1e-23 112.8 98 56.1
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 4.4e-21 105.1 115 41.7
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 5.5e-16 88.2 99 44.4
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.8e-15 85.9 59 59.3
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 7.8e-10 67.8 63 55.6
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 7.8e-10 67.8 38 71.1
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 2.3e-09 66.2 61 55.7
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 8.6e-09 64.3 33 72.7
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 4.7e-07 58.5 64 48.4


User provided reference genes

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