Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g16096 Beta vulgaris HOM05D003953 ORTHO05D004618 1.7e-37 158.7 74 100.0
AUR62020054 Chenopodium quinoa HOM05D003953 ORTHO05D004618 1.5e-33 145.6 72 93.1
AUR62001716 Chenopodium quinoa HOM05D003953 ORTHO05D004618 5.8e-33 143.7 70 94.3
Ah.13g070310 Amaranthus hybridus HOM05D003953 ORTHO05D004618 3.9e-29 131.0 70 85.7
Hund03162 Selenicereus undatus HOM05D003953 ORTHO05D004618 3.6e-27 124.4 72 84.7
Sc12g0001080 Simmondsia chinensis HOM05D003953 ORTHO05D004618 1.2e-25 119.4 71 77.5
Psat3g190320 Pisum sativum HOM05D003953 ORTHO05D004618 7.6e-25 116.7 69 72.5
TPR.G3298 Trifolium pratense HOM05D003953 ORTHO05D004618 9.9e-25 116.3 69 73.9
TPR.G4479 Trifolium pratense HOM05D003953 ORTHO05D004618 1.3e-24 115.9 69 73.9
Gorai.003G126400 Gossypium raimondii HOM05D003953 ORTHO05D004618 4.9e-24 114.0 69 75.4
Gohir.D03G119900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 6.4e-24 113.6 69 73.9
Gohir.A03G047300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-23 112.8 69 73.9
Gorai.004G180400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.1e-23 112.8 69 75.4
Gorai.006G047400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.1e-23 112.8 69 75.4
Gorai.008G072300 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.1e-23 112.8 69 75.4
Oeu042438.1 Olea europaea HOM05D003953 ORTHO05D004618 1.1e-23 112.8 72 69.4
Duzib150G0459 Durio zibethinus HOM05D003953 ORTHO05D004618 1.9e-23 112.1 69 72.5
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 1.9e-23 112.1 70 70.0
MSTRG.7467 Avicennia marina HOM05D003953 ORTHO05D004618 2.4e-23 111.7 72 69.4
Gohir.D04G155200 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.4e-23 111.7 69 75.4
Glyma.18G281100 Glycine max HOM05D003953 ORTHO05D004618 3.2e-23 111.3 72 73.6
SalBow8G2167 Salvia bowleyana HOM05D003953 ORTHO05D004618 3.2e-23 111.3 72 69.4
SalBow8G3221 Salvia bowleyana HOM05D003953 ORTHO05D004618 3.2e-23 111.3 72 69.4
Dinv06204 Davidia involucrata HOM05D003953 ORTHO05D004618 4.2e-23 110.9 69 71.0
Gohir.D07G180800 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.2e-23 110.9 69 73.9
Gorai.011G189400 Gossypium raimondii HOM05D003953 ORTHO05D004618 4.2e-23 110.9 69 73.9
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 4.2e-23 110.9 69 69.6
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 4.2e-23 110.9 69 69.6
Gohir.D05G283601 Gossypium hirsutum HOM05D003953 ORTHO05D004618 7.1e-23 110.2 69 73.9
Gohir.D05G283900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 7.1e-23 110.2 69 73.9
Lj6g0017568 Lotus japonicus HOM05D003953 ORTHO05D004618 1.2e-22 109.4 69 69.6
Medtr7g020830 Medicago truncatula HOM05D003953 ORTHO05D004618 1.2e-22 109.4 63 76.2
Nitab4.5_0002405g0070 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.2e-22 109.4 69 69.6
SalBow1G5086 Salvia bowleyana HOM05D003953 ORTHO05D004618 1.2e-22 109.4 72 68.1
Sopen06g001840 Solanum pennellii HOM05D003953 ORTHO05D004618 1.2e-22 109.4 69 71.0
Glyma.19G045500 Glycine max HOM05D003953 ORTHO05D004618 2.1e-22 108.6 69 68.1
Gohir.D09G041350 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.1e-22 108.6 69 73.9
Gorai.009G298400 Gossypium raimondii HOM05D003953 ORTHO05D004618 2.1e-22 108.6 69 72.5
PGSC0003DMG400020825 Solanum tuberosum HOM05D003953 ORTHO05D004618 2.1e-22 108.6 69 71.0
Lj1g0022776 Lotus japonicus HOM05D003953 ORTHO05D004618 2.7e-22 108.2 69 68.1
Migut.M00943 Erythranthe guttata HOM05D003953 ORTHO05D004618 3.5e-22 107.8 68 70.6
Nn2g13557 Nelumbo nucifera HOM05D003953 ORTHO05D004618 3.5e-22 107.8 69 69.6
SGA_v2.0_scaffold44G16545 Striga asiatica HOM05D003953 ORTHO05D004618 3.5e-22 107.8 69 68.1
TWI79G0904 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 3.5e-22 107.8 69 66.7
CAN.G1186.33 Capsicum annuum HOM05D003953 ORTHO05D004618 4.6e-22 107.5 69 69.6
ECA248G2580 Erigeron canadensis HOM05D003953 ORTHO05D004618 4.6e-22 107.5 65 73.8
Manes.01G166500 Manihot esculenta HOM05D003953 ORTHO05D004618 4.6e-22 107.5 56 85.7
Potri.001G246600 Populus trichocarpa HOM05D003953 ORTHO05D004618 4.6e-22 107.5 61 77.0
Thecc.09G309300 Theobroma cacao HOM05D003953 ORTHO05D004618 4.6e-22 107.5 69 71.0
CSS0034778 Camellia sinensis var. sinensis HOM05D003953 ORTHO05D004618 6.0e-22 107.1 68 70.6
Gohir.A08G112100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 6.0e-22 107.1 69 71.0
HanXRQChr09g0262301 Helianthus annuus HOM05D003953 ORTHO05D004618 6.0e-22 107.1 66 72.7
Hund04903 Selenicereus undatus HOM05D003953 ORTHO05D004618 6.0e-22 107.1 59 83.1
THA.LOC104800713 Tarenaya hassleriana HOM05D003953 ORTHO05D004618 6.0e-22 107.1 71 70.4
Ciclev10029631m.g Citrus clementina HOM05D003953 ORTHO05D004618 7.8e-22 106.7 69 69.6
Gohir.D09G041300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 7.8e-22 106.7 69 72.5
Phvul.004G063100 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 7.8e-22 106.7 64 73.4
Nitab4.5_0000880g0090 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.0e-21 106.3 69 66.7
Phvul.008G020000 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 1.0e-21 106.3 62 77.4
PGSC0003DMG400013346 Solanum tuberosum HOM05D003953 ORTHO05D004618 1.0e-21 106.3 69 69.6
COL.COLO4_19069 Corchorus olitorius HOM05D003953 ORTHO05D004618 1.3e-21 105.9 63 71.4
Gohir.A06G113000 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 69 71.0
Gohir.A06G119302 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 69 71.0
Gohir.A12G147900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 69 71.0
Gohir.D04G005500 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 69 71.0
Gohir.D07G184100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 69 71.0
Gohir.D11G224100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-21 105.9 61 78.7
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea HOM05D003953 ORTHO05D004618 1.7e-21 105.5 68 69.1
Duzib168G1059 Durio zibethinus HOM05D003953 ORTHO05D004618 1.7e-21 105.5 69 69.6
TAR623G0256 Trochodendron aralioides HOM05D003953 ORTHO05D004618 1.7e-21 105.5 72 66.7
Cc09_g02060 Coffea canephora HOM05D003953 ORTHO05D004618 2.3e-21 105.1 69 68.1
Sabra16G0149700 Salix brachista HOM05D003953 ORTHO05D004618 2.3e-21 105.1 59 78.0
Sopen11g006990 Solanum pennellii HOM05D003953 ORTHO05D004618 2.3e-21 105.1 69 66.7
unitig_92.g28151 Utricularia gibba HOM05D003953 ORTHO05D004618 2.3e-21 105.1 62 74.2
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 2.3e-21 105.1 62 75.8
GSVIVG01024830001 Vitis vinifera HOM05D003953 ORTHO05D004618 3.0e-21 104.8 69 69.6
Gohir.D07G180600 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.9e-21 104.4 67 71.6
Sed0019378 Sechium edule HOM05D003953 ORTHO05D004618 3.9e-21 104.4 70 68.6
TWI75G1138 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 3.9e-21 104.4 69 65.2
Lsat_1_v5_gn_5_168181 Lactuca sativa HOM05D003953 ORTHO05D004618 5.1e-21 104.0 66 68.2
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea HOM05D003953 ORTHO05D004618 6.6e-21 103.6 62 72.6
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea HOM05D003953 ORTHO05D004618 6.6e-21 103.6 62 72.6
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea HOM05D003953 ORTHO05D004618 6.6e-21 103.6 62 72.6
Gohir.A06G083400 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.7e-21 103.2 61 77.0
RcHm_v2.0_Chr2g0128821 Rosa chinensis HOM05D003953 ORTHO05D004618 8.7e-21 103.2 69 65.2
CANSAT54G2674 Cannabis sativa HOM05D003953 ORTHO05D004618 1.1e-20 102.8 70 64.3
TAR369G1135 Trochodendron aralioides HOM05D003953 ORTHO05D004618 1.1e-20 102.8 69 66.7
vmacro03011 Vaccinium macrocarpon HOM05D003953 ORTHO05D004618 1.1e-20 102.8 62 72.6
CiPaw.13G084200 Carya illinoinensis HOM05D003953 ORTHO05D004618 1.5e-20 102.4 65 72.3
CsaV3_1G035860 Cucumis sativus L. HOM05D003953 ORTHO05D004618 1.9e-20 102.1 65 70.8
DCAR_015642 Daucus carota HOM05D003953 ORTHO05D004618 1.9e-20 102.1 62 71.0
Eucgr.G01038 Eucalyptus grandis HOM05D003953 ORTHO05D004618 1.9e-20 102.1 67 67.2
FAN02G2926 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.9e-20 102.1 69 63.8
FAN03G1864 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.9e-20 102.1 69 63.8
FAN05G4346 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.9e-20 102.1 69 63.8
Sed0025309 Sechium edule HOM05D003953 ORTHO05D004618 1.9e-20 102.1 62 72.6
Solyc11g012195.1 Solanum lycopersicum HOM05D003953 ORTHO05D004618 1.9e-20 102.1 69 63.8
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea HOM05D003953 ORTHO05D004618 2.5e-20 101.7 62 71.0
CDE05G3507 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 2.5e-20 101.7 69 66.7
FvH4_7g06540 Fragaria vesca HOM05D003953 ORTHO05D004618 2.5e-20 101.7 69 63.8
FAN01G1905 Fragaria x ananassa HOM05D003953 ORTHO05D004618 2.5e-20 101.7 69 63.8
FAN10G1677 Fragaria x ananassa HOM05D003953 ORTHO05D004618 2.5e-20 101.7 69 63.8
FAN14G2908 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.3e-20 101.3 69 65.2
Oeu001049.1 Olea europaea HOM05D003953 ORTHO05D004618 3.3e-20 101.3 60 73.3
Nitab4.5_0002142g0080 Nicotiana tabacum HOM05D003953 ORTHO05D004618 4.3e-20 100.9 69 65.2
ClCG03G001080 Citrullus lanatus HOM05D003953 ORTHO05D004618 5.6e-20 100.5 55 80.0
ClCG03G002440 Citrullus lanatus HOM05D003953 ORTHO05D004618 5.6e-20 100.5 55 80.0
CsaV3_1G013120 Cucumis sativus L. HOM05D003953 ORTHO05D004618 5.6e-20 100.5 55 80.0
MBI04_g47172_MAGBIO Magnolia biondii HOM05D003953 ORTHO05D004618 5.6e-20 100.5 72 63.9
Rhsim13G0075300 Rhododendron simsii HOM05D003953 ORTHO05D004618 5.6e-20 100.5 62 69.4
HPP92_011695 Vanilla planifolia HOM05D003953 ORTHO05D004618 5.6e-20 100.5 62 75.8
CDE05G2370 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 9.6e-20 99.8 69 65.2
Atru.chr3.4044 Acer truncatum HOM05D003953 ORTHO05D004618 1.3e-19 99.4 68 61.8
Peaxi162Scf00123g01014 Petunia axillaris HOM05D003953 ORTHO05D004618 1.3e-19 99.4 62 72.6
RcHm_v2.0_Chr1g0334971 Rosa chinensis HOM05D003953 ORTHO05D004618 1.3e-19 99.4 69 62.3
SEGI_41348 Sequoiadendron giganteum HOM05D003953 ORTHO05D004618 1.6e-19 99.0 67 62.7
ATR1136G184 Amborella trichopoda HOM05D003953 ORTHO05D004618 2.8e-19 98.2 63 71.4
PGR102G1512 Punica granatum HOM05D003953 ORTHO05D004618 2.8e-19 98.2 61 72.1
Dinv34318 Davidia involucrata HOM05D003953 ORTHO05D004618 3.6e-19 97.8 52 80.8
Lalb_Chr21g0317911 Lupinus albus HOM05D003953 ORTHO05D004618 3.6e-19 97.8 59 76.3
MD10G1078400 Malus domestica HOM05D003953 ORTHO05D004618 3.6e-19 97.8 69 62.3
Prupe.2G047700 Prunus persica HOM05D003953 ORTHO05D004618 3.6e-19 97.8 69 60.9
Aqoxy128s009 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 4.8e-19 97.4 70 64.3
Zm00001eb169140 Zea mays HOM05D003953 ORTHO05D004618 1.8e-18 95.5 69 62.3
Cfa020872 Carpinus fangiana HOM05D003953 ORTHO05D004618 2.4e-18 95.1 59 74.6
Haze_19301 Corylus avellana HOM05D003953 ORTHO05D004618 2.4e-18 95.1 59 74.6
Os12g0194700 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 2.4e-18 95.1 61 67.2
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis HOM05D003953 ORTHO05D004618 3.1e-18 94.7 69 58.0
Prupe.3G125300 Prunus persica HOM05D003953 ORTHO05D004618 4.0e-18 94.4 69 62.3
Cfa011625 Carpinus fangiana HOM05D003953 ORTHO05D004618 5.3e-18 94.0 59 71.2
Lalb_Chr21g0317731 Lupinus albus HOM05D003953 ORTHO05D004618 6.9e-18 93.6 59 72.9
Cpa.g.sc112.95 Carica papaya HOM05D003953 ORTHO05D004618 9.0e-18 93.2 68 61.8
FAN06G2211 Fragaria x ananassa HOM05D003953 ORTHO05D004618 9.0e-18 93.2 80 55.0
Aa31LG5G6920 Aethionema arabicum HOM05D003953 ORTHO05D004618 1.2e-17 92.8 69 63.8
Haze_24228 Corylus avellana HOM05D003953 ORTHO05D004618 1.5e-17 92.4 59 67.8
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis HOM05D003953 ORTHO05D004618 2.0e-17 92.0 60 66.7
PSO384G4465 Papaver somniferum HOM05D003953 ORTHO05D004618 2.0e-17 92.0 68 61.8
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis HOM05D003953 ORTHO05D004618 2.6e-17 91.7 60 66.7
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.3e-16 89.4 59 66.1
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.3e-16 89.4 59 66.1
Sp4g12270 Schrenkiella parvula HOM05D003953 ORTHO05D004618 1.3e-16 89.4 63 66.7
C04p21300 Brassica napus HOM05D003953 ORTHO05D004618 2.2e-16 88.6 63 66.7
BolC4t23659H Brassica oleracea HOM05D003953 ORTHO05D004618 2.2e-16 88.6 63 66.7
Mapoly0064s0065 Marchantia polymorpha HOM05D003953 ORTHO05D004618 2.2e-16 88.6 69 59.4
PSO339G2392 Papaver somniferum HOM05D003953 ORTHO05D004618 2.9e-16 88.2 59 67.8
A05p15860 Brassica napus HOM05D003953 ORTHO05D004618 6.4e-16 87.0 63 65.1
Eucgr.G01035 Eucalyptus grandis HOM05D003953 ORTHO05D004618 6.4e-16 87.0 65 58.5
Pp3c3_11180 Physcomitrium patens HOM05D003953 ORTHO05D004618 6.4e-16 87.0 69 53.6
BcaB02g10260 Brassica carinata HOM05D003953 ORTHO05D004618 1.1e-15 86.3 63 65.1
SMO228G0103 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 1.1e-15 86.3 62 58.1
AL4G24250 Arabidopsis lyrata HOM05D003953 ORTHO05D004618 3.2e-15 84.7 62 61.3
A04p22530 Brassica napus HOM05D003953 ORTHO05D004618 4.2e-15 84.3 63 63.5
BraA04t17798Z Brassica rapa HOM05D003953 ORTHO05D004618 4.2e-15 84.3 63 63.5
AT2G29540 Arabidopsis thaliana HOM05D003953 ORTHO05D004618 2.1e-14 82.0 62 59.7
Os11g0218100 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 2.1e-14 82.0 61 62.3
Carub.0004s1059 Capsella rubella HOM05D003953 ORTHO05D004618 2.7e-14 81.6 62 58.1
CARHR122880 Cardamine hirsuta HOM05D003953 ORTHO05D004618 1.0e-13 79.7 63 61.9
FAN09G1296 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.8e-13 79.0 123 36.6
BcaC02g08078 Brassica carinata HOM05D003953 ORTHO05D004618 3.0e-13 78.2 56 64.3
C04p58680 Brassica napus HOM05D003953 ORTHO05D004618 3.0e-13 78.2 56 64.3
Thhalv10017434m.g Eutrema salsugineum HOM05D003953 ORTHO05D004618 5.1e-13 77.4 62 59.7
Mapoly0079s0034 Marchantia polymorpha HOM05D003953 ORTHO05D004618 8.7e-13 76.6 69 53.6
Cre12.g484100 Chlamydomonas reinhardtii HOM05D003953 ORTHO05D004618 2.5e-12 75.1 64 51.6
Actinidia25120 Actinidia chinensis HOM05D003953 ORTHO05D004618 5.6e-12 73.9 58 65.5
MCO07G039 Micromonas commoda HOM05D003953 ORTHO05D004618 6.2e-11 70.5 63 49.2
Gorai.001G172100 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.9e-07 58.9 26 96.2
PRCOL_00001819 Prasinoderma coloniale HOM05D003953 ORTHO05D004618 4.2e-07 57.8 56 44.6
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 9.3e-07 56.6 36 69.4
Gohir.D02G136950 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.6e-06 55.8 26 92.3
Phvul.001G016450 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 2.7e-06 55.1 25 96.0
SMO351G0643 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 3.5e-06 54.7 26 80.8
Peaxi162Scf00025g01315 Petunia axillaris HOM05D003953 ORTHO05D004618 7.9e-06 53.5 42 54.8


User provided reference genes

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