Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11533 Beta vulgaris HOM05D007165 ORTHO05D008978 3.7e-191 671.4 341 100.0
AUR62037668 Chenopodium quinoa HOM05D007165 ORTHO05D008978 1.1e-41 174.9 356 39.0
Haze_20941 Corylus avellana HOM05D007165 ORTHO05D008978 7.5e-35 152.1 358 35.2
Hund15168 Selenicereus undatus HOM05D007165 ORTHO05D008978 7.5e-35 152.1 365 35.6
Sabra16G0106900 Salix brachista HOM05D007165 ORTHO05D008978 1.1e-33 148.3 361 35.2
RcHm_v2.0_Chr3g0463951 Rosa chinensis HOM05D007165 ORTHO05D008978 9.2e-33 145.2 358 34.9
Sc01g0006720 Simmondsia chinensis HOM05D007165 ORTHO05D008978 3.5e-32 143.3 343 35.0
FvH4_6g12151 Fragaria vesca HOM05D007165 ORTHO05D008978 7.8e-32 142.1 358 34.6
FAN14G3306 Fragaria x ananassa HOM05D007165 ORTHO05D008978 2.3e-31 140.6 357 34.2
Potri.016G110400 Populus trichocarpa HOM05D007165 ORTHO05D008978 2.3e-31 140.6 361 33.8
COL.COLO4_14616 Corchorus olitorius HOM05D007165 ORTHO05D008978 3.9e-31 139.8 357 33.3
Aqoxy1G00731 Aquilegia oxysepala HOM05D007165 ORTHO05D008978 8.6e-31 138.7 364 32.4
CSS0016707 Camellia sinensis var. sinensis HOM05D007165 ORTHO05D008978 3.3e-30 136.7 364 33.5
Solyc09g013090.4 Solanum lycopersicum HOM05D007165 ORTHO05D008978 4.3e-30 136.3 365 32.9
MD12G1159500 Malus domestica HOM05D007165 ORTHO05D008978 9.5e-30 135.2 356 33.7
Thecc.05G023100 Theobroma cacao HOM05D007165 ORTHO05D008978 9.5e-30 135.2 357 32.5
Dinv37088 Davidia involucrata HOM05D007165 ORTHO05D008978 3.6e-29 133.3 355 33.0
Ciclev10012630m.g Citrus clementina HOM05D007165 ORTHO05D008978 4.7e-29 132.9 339 34.2
Gohir.A01G225000 Gossypium hirsutum HOM05D007165 ORTHO05D008978 6.2e-29 132.5 355 31.8
Duzib106G1865 Durio zibethinus HOM05D007165 ORTHO05D008978 1.4e-28 131.3 357 32.8
PGSC0003DMG400020352 Solanum tuberosum HOM05D007165 ORTHO05D008978 1.4e-28 131.3 356 32.6
CANSAT35G1670 Cannabis sativa HOM05D007165 ORTHO05D008978 1.8e-28 131.0 359 32.6
CAN.G284.16 Capsicum annuum HOM05D007165 ORTHO05D008978 1.8e-28 131.0 358 32.1
SalBow4G2442 Salvia bowleyana HOM05D007165 ORTHO05D008978 1.8e-28 131.0 344 33.4
TWI53G0438 Tripterygium wilfordii HOM05D007165 ORTHO05D008978 3.1e-28 130.2 337 35.0
Migut.L01990 Erythranthe guttata HOM05D007165 ORTHO05D008978 4.0e-28 129.8 358 32.1
Gohir.D01G214600 Gossypium hirsutum HOM05D007165 ORTHO05D008978 4.0e-28 129.8 355 31.5
Cc06_g01730 Coffea canephora HOM05D007165 ORTHO05D008978 6.8e-28 129.0 362 31.8
Gorai.002G260800 Gossypium raimondii HOM05D007165 ORTHO05D008978 2.0e-27 127.5 355 31.3
Lj3g0014026 Lotus japonicus HOM05D007165 ORTHO05D008978 2.0e-27 127.5 344 34.3
Lsat_1_v5_gn_5_155420 Lactuca sativa HOM05D007165 ORTHO05D008978 3.4e-27 126.7 342 32.7
Peaxi162Scf00141g00130 Petunia axillaris HOM05D007165 ORTHO05D008978 3.4e-27 126.7 365 31.5
Nitab4.5_0000008g0590 Nicotiana tabacum HOM05D007165 ORTHO05D008978 4.4e-27 126.3 366 31.4
Actinidia13786 Actinidia chinensis HOM05D007165 ORTHO05D008978 5.8e-27 125.9 363 32.2
Manes.09G101600 Manihot esculenta HOM05D007165 ORTHO05D008978 5.8e-27 125.9 356 33.1
Oeu044367.1 Olea europaea HOM05D007165 ORTHO05D008978 7.5e-27 125.6 355 32.1
HanXRQChr13g0406391 Helianthus annuus HOM05D007165 ORTHO05D008978 1.3e-26 124.8 362 32.0
MBI14_g32935_MAGBIO Magnolia biondii HOM05D007165 ORTHO05D008978 1.3e-26 124.8 338 34.0
Prupe.6G270100 Prunus persica HOM05D007165 ORTHO05D008978 1.7e-26 124.4 358 32.4
GSVIVG01034018001 Vitis vinifera HOM05D007165 ORTHO05D008978 1.7e-26 124.4 358 31.0
Nitab4.5_0006254g0040 Nicotiana tabacum HOM05D007165 ORTHO05D008978 2.2e-26 124.0 366 31.1
PGR031G1942 Punica granatum HOM05D007165 ORTHO05D008978 2.2e-26 124.0 356 31.2
Atru.chr8.2138 Acer truncatum HOM05D007165 ORTHO05D008978 1.9e-25 120.9 338 33.7
CDE04G0686 Ceratophyllum demersum HOM05D007165 ORTHO05D008978 5.4e-25 119.4 358 30.4
Medtr4g014750 Medicago truncatula HOM05D007165 ORTHO05D008978 5.4e-25 119.4 363 30.0
Ca_23813_v3 Cicer arietinum L. HOM05D007165 ORTHO05D008978 7.0e-25 119.0 340 32.4
Phvul.010G008100 Phaseolus vulgaris HOM05D007165 ORTHO05D008978 1.2e-24 118.2 337 32.6
ECA248G1723 Erigeron canadensis HOM05D007165 ORTHO05D008978 2.7e-24 117.1 365 31.2
Lalb_Chr13g0291291 Lupinus albus HOM05D007165 ORTHO05D008978 2.7e-24 117.1 357 31.1
Glyma.03G076600 Glycine max HOM05D007165 ORTHO05D008978 4.6e-24 116.3 357 30.8
Psat7g246920 Pisum sativum HOM05D007165 ORTHO05D008978 4.6e-24 116.3 359 30.4
Eucgr.B02768 Eucalyptus grandis HOM05D007165 ORTHO05D008978 7.8e-24 115.5 360 30.6
AUR62041057 Chenopodium quinoa HOM05D007165 ORTHO05D008978 3.9e-23 113.2 220 41.4
TPR.G5238 Trifolium pratense HOM05D007165 ORTHO05D008978 3.9e-23 113.2 358 30.2
PSO339G3827 Papaver somniferum HOM05D007165 ORTHO05D008978 5.0e-23 112.8 339 31.6
MD04G1146300 Malus domestica HOM05D007165 ORTHO05D008978 6.6e-23 112.5 173 43.9
Os03g0266000 Oryza sativa ssp. japonica HOM05D007165 ORTHO05D008978 8.6e-23 112.1 173 40.5
ClCG10G021790 Citrullus lanatus HOM05D007165 ORTHO05D008978 1.5e-22 111.3 337 32.6
FAN02G3691 Fragaria x ananassa HOM05D007165 ORTHO05D008978 1.9e-22 110.9 335 31.9
Lj3A957G31 Lonicera japonica HOM05D007165 ORTHO05D008978 1.9e-22 110.9 174 42.0
Thhalv10017020m.g Eutrema salsugineum HOM05D007165 ORTHO05D008978 2.5e-22 110.5 362 30.7
Sp4g20350 Schrenkiella parvula HOM05D007165 ORTHO05D008978 2.5e-22 110.5 358 30.4
BcaB01g03732 Brassica carinata HOM05D007165 ORTHO05D008978 1.2e-21 108.2 360 31.1
FAN14G4381 Fragaria x ananassa HOM05D007165 ORTHO05D008978 1.2e-21 108.2 335 31.9
DCAR_028832 Daucus carota HOM05D007165 ORTHO05D008978 1.6e-21 107.8 175 41.1
BraA03t11341Z Brassica rapa HOM05D007165 ORTHO05D008978 2.1e-21 107.5 363 30.9
CARHR132600 Cardamine hirsuta HOM05D007165 ORTHO05D008978 2.1e-21 107.5 361 30.5
arahy.Tifrunner.gnm1.ann1.9C1VP5 Arachis hypogaea HOM05D007165 ORTHO05D008978 3.6e-21 106.7 342 29.5
BcaC01g05571 Brassica carinata HOM05D007165 ORTHO05D008978 3.6e-21 106.7 363 30.6
BolC3t14865H Brassica oleracea HOM05D007165 ORTHO05D008978 3.6e-21 106.7 363 30.6
FAN02G3056 Fragaria x ananassa HOM05D007165 ORTHO05D008978 3.6e-21 106.7 167 43.1
PSO384G5095 Papaver somniferum HOM05D007165 ORTHO05D008978 3.6e-21 106.7 338 30.5
Aa31LG9G12450 Aethionema arabicum HOM05D007165 ORTHO05D008978 1.1e-20 105.1 361 31.0
CsaV3_3G034200 Cucumis sativus L. HOM05D007165 ORTHO05D008978 1.1e-20 105.1 343 32.1
A03p21020 Brassica napus HOM05D007165 ORTHO05D008978 1.4e-20 104.8 364 30.8
C03p24760 Brassica napus HOM05D007165 ORTHO05D008978 2.3e-20 104.0 364 30.2
Rhsim05G0205100 Rhododendron simsii HOM05D007165 ORTHO05D008978 2.3e-20 104.0 350 33.7
MELO3C009195.2 Cucumis melo HOM05D007165 ORTHO05D008978 2.6e-19 100.5 337 31.8
vmacro20232 Vaccinium macrocarpon HOM05D007165 ORTHO05D008978 2.6e-19 100.5 175 41.7
AL4G35020 Arabidopsis lyrata HOM05D007165 ORTHO05D008978 1.3e-18 98.2 342 30.1
FAN05G2803 Fragaria x ananassa HOM05D007165 ORTHO05D008978 1.3e-18 98.2 356 29.8
Psat0s527g0040 Pisum sativum HOM05D007165 ORTHO05D008978 1.3e-18 98.2 349 29.2
Zm00001eb011830 Zea mays HOM05D007165 ORTHO05D008978 1.3e-18 98.2 360 27.2
AT2G38025 Arabidopsis thaliana HOM05D007165 ORTHO05D008978 1.7e-18 97.8 340 29.4
FAN09G1003 Fragaria x ananassa HOM05D007165 ORTHO05D008978 6.4e-18 95.9 335 30.4
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.3e-18 95.5 165 41.2
unitig_37.g12669 Utricularia gibba HOM05D000064 ORTHO05D008978 1.4e-17 94.7 356 27.0
ClCG03G004540 Citrullus lanatus HOM05D007165 ORTHO05D008978 3.2e-17 93.6 177 38.4
Sed0010651 Sechium edule HOM05D007165 ORTHO05D008978 5.4e-17 92.8 337 29.7
SMO115G0074 Selaginella moellendorffii HOM05D007165 ORTHO05D008978 1.2e-16 91.7 174 35.6
ATR0618G402 Amborella trichopoda HOM05D007165 ORTHO05D008978 2.7e-16 90.5 354 28.0
arahy.Tifrunner.gnm1.ann1.X9M8LR Arachis hypogaea HOM05D007165 ORTHO05D008978 6.0e-16 89.4 360 27.8
Cpa.g.sc56.106 Carica papaya HOM05D007165 ORTHO05D008978 6.0e-16 89.4 331 29.0
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 7.8e-16 89.0 162 40.7
Carub.0004s2000 Capsella rubella HOM05D007165 ORTHO05D008978 1.0e-15 88.6 172 38.4
Pp3c19_1540 Physcomitrium patens HOM05D007165 ORTHO05D008978 1.7e-15 87.8 177 33.9
CiPaw.09G205300 Carya illinoinensis HOM05D007165 ORTHO05D008978 5.1e-15 86.3 310 30.0
BcaC01g05573 Brassica carinata HOM05D007165 ORTHO05D008978 1.9e-14 84.3 172 37.8
Mapoly0048s0067 Marchantia polymorpha HOM05D007165 ORTHO05D008978 4.3e-14 83.2 178 33.1
Sopen09g006930 Solanum pennellii HOM05D007165 ORTHO05D008978 3.1e-12 77.0 319 27.9
VMungo0331G0350 Vigna mungo HOM05D007165 ORTHO05D008978 6.8e-12 75.9 202 33.7
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 4.4e-11 73.2 295 29.8
Nn3g18250 Nelumbo nucifera HOM05D007165 ORTHO05D008978 5.8e-11 72.8 180 35.6
SGA_v2.0_scaffold106G30527 Striga asiatica HOM05D007165 ORTHO05D008978 1.4e-09 68.2 356 25.3
THA.LOC104805753 Tarenaya hassleriana HOM05D007165 ORTHO05D008978 5.4e-09 66.2 226 30.1
MCO05G423 Micromonas commoda HOM05D007165 ORTHO05D008978 4.6e-08 63.2 178 28.1
Glyma.01G111000 Glycine max HOM05D007165 ORTHO05D008978 3.9e-07 60.1 165 32.7
FvH4_6g12160 Fragaria vesca HOM05D007165 ORTHO05D008978 1.9e-06 57.8 340 25.9


User provided reference genes

Program Settings