Gene: Solyc09g013090.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g013090.4
  • Transcript Identifier Solyc09g013090.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 5491598-5496212 : positive

Gene Family Information

  • ID HOM05D007165
  • #Genes/#Species 110/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g013090.4.1
  • uniprot A0A3Q7I0K2
  • gene_id Solyc09g013090

Descriptions

  • Description OTU domain-containing protein (AHRD V3.3 *** A0A1Q3BKJ5_CEPFO)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IBA
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0030433
IBA
IEA
GOA Databaseubiquitin-dependent ERAD pathway
GO:0030433
IEA
InterProubiquitin-dependent ERAD pathway
GO:0030968
IBA
GOA Databaseendoplasmic reticulum unfolded protein response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0101005
IEA
GOA Databasedeubiquitinase activity
GO:0101005
IEA
InterProdeubiquitinase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR039138 Ubiquitin thioesterase OTU1/2/3
IPR003323 OTU domain
Mapman id Description
19.2.3.1.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU3-4)