Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.1e-63 245.7 142 100.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 4.8e-52 208.0 140 80.0
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 2.0e-50 202.6 141 77.3
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 7.7e-42 174.1 119 76.5
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.7e-41 172.9 136 71.3
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 2.9e-41 172.2 120 72.5
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.1e-40 170.2 118 74.6
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.9e-40 169.5 117 74.4
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 5.5e-40 167.9 118 74.6
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 7.2e-40 167.5 142 70.4
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 9.4e-40 167.2 118 72.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.6e-39 166.4 142 64.8
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.1e-39 166.0 117 72.6
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.1e-39 166.0 117 72.6
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.6e-39 165.2 94 91.5
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 4.7e-39 164.9 118 70.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 4.7e-39 164.9 111 73.9
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 6.1e-39 164.5 142 63.4
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 7.9e-39 164.1 117 72.6
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 1.0e-38 163.7 111 73.0
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 1.4e-38 163.3 111 73.0
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 1.4e-38 163.3 111 73.0
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 1.4e-38 163.3 115 71.3
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 1.4e-38 163.3 142 64.1
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.4e-38 163.3 125 69.6
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.8e-38 162.9 94 90.4
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 2.3e-38 162.5 119 73.1
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 3.0e-38 162.2 120 69.2
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 3.9e-38 161.8 140 61.4
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 3.9e-38 161.8 126 73.8
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 5.2e-38 161.4 111 73.9
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.2e-38 161.4 94 89.4
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 6.7e-38 161.0 111 72.1
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 6.7e-38 161.0 111 72.1
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 6.7e-38 161.0 111 72.1
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 6.7e-38 161.0 120 66.7
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 6.7e-38 161.0 111 72.1
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.5e-37 159.8 115 69.6
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 1.5e-37 159.8 116 71.6
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.6e-37 159.1 118 68.6
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 3.3e-37 158.7 120 67.5
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 4.4e-37 158.3 125 67.2
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.7e-37 157.9 117 65.8
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 5.7e-37 157.9 140 60.7
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 5.7e-37 157.9 111 69.4
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 7.4e-37 157.5 120 71.7
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 9.7e-37 157.1 120 71.7
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.7e-36 156.4 109 73.4
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 6.3e-36 154.5 141 61.0
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 1.1e-35 153.7 120 67.5
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.1e-35 153.7 132 59.8
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.4e-35 153.3 120 65.8
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.8e-35 152.9 108 69.4
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.8e-35 152.9 118 67.8
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.8e-35 152.9 118 67.8
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.8e-35 152.9 120 66.7
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 3.1e-35 152.1 142 62.0
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 4.1e-35 151.8 118 66.9
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 4.1e-35 151.8 111 72.1
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 4.1e-35 151.8 118 64.4
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 5.3e-35 151.4 130 63.8
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.3e-35 151.4 141 60.3
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 7.0e-35 151.0 111 70.3
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 9.1e-35 150.6 120 66.7
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 1.2e-34 150.2 146 58.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.6e-34 149.8 120 64.2
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 2.0e-34 149.4 120 65.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.6e-34 149.1 117 65.8
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 4.5e-34 148.3 120 64.2
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 5.9e-34 147.9 111 69.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.0e-33 147.1 118 64.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 1.3e-33 146.7 112 67.0
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.7e-33 146.4 114 66.7
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 5.0e-33 144.8 118 64.4
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 5.0e-33 144.8 118 63.6
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 5.0e-33 144.8 106 67.9
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 8.5e-33 144.1 111 66.7
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.1e-32 143.7 121 62.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.1e-32 143.7 111 69.4
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.5e-32 143.3 112 66.1
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.5e-32 143.3 114 64.0
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.5e-32 142.5 109 67.9
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 4.2e-32 141.7 107 69.2
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 5.5e-32 141.4 105 70.5
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 1.6e-31 139.8 163 49.7
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.6e-31 139.8 121 62.8
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 3.6e-31 138.7 111 64.9
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 3.6e-31 138.7 149 51.7
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 4.7e-31 138.3 114 65.8
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.1e-31 137.9 106 63.2
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.0e-30 137.1 125 59.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 8.8e-30 134.0 125 57.6
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 7.5e-29 131.0 115 60.9
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.3e-28 130.2 112 62.5
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 4.8e-28 128.3 96 66.7
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 8.5e-25 117.5 76 75.0
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 8.5e-25 117.5 76 75.0
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.5e-24 115.9 96 61.5
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 7.2e-24 114.4 108 53.7
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.8e-22 109.8 118 55.9
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.8e-22 107.5 71 70.4
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 8.8e-22 107.5 108 53.7
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 1.2e-21 107.1 91 61.5
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.5e-21 106.7 122 50.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.8e-19 99.8 80 65.0
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 2.0e-18 96.3 70 64.3
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 5.9e-18 94.7 100 47.0
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 8.6e-17 90.9 100 50.0
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.9e-16 89.7 77 61.0
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.9e-16 89.7 66 66.7
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 5.5e-16 88.2 77 62.3
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 5.0e-09 65.1 105 36.2
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.6e-07 60.1 49 61.2
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.4e-06 57.0 96 38.5
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 1.4e-06 57.0 38 71.1


User provided reference genes

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