Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 0.0e+00 1177.9 603 100.0
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 8.8e-180 634.4 609 57.5
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.3e-167 593.2 419 72.1
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.8e-156 557.0 468 62.8
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 6.8e-140 501.9 619 45.7
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 3.7e-138 496.1 614 45.3
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 2.3e-135 486.9 443 61.9
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 3.9e-135 486.1 614 45.1
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 8.1e-133 478.4 618 45.8
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 8.4e-130 468.4 606 43.9
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.2e-128 464.5 581 45.6
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 3.5e-128 463.0 605 45.3
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 7.8e-128 461.8 628 43.9
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 3.3e-126 456.4 604 43.0
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 1.6e-125 454.1 610 43.9
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.6e-125 454.1 602 43.7
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 1.8e-124 450.7 588 44.0
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 9.0e-124 448.4 603 43.3
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 5.8e-123 445.7 613 43.9
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 6.4e-122 442.2 644 42.9
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.9e-121 440.7 610 43.6
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.5e-120 436.4 611 42.1
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 6.0e-120 435.6 614 42.3
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.3e-119 434.5 632 41.9
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 3.9e-119 433.0 611 41.7
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 2.5e-118 430.3 734 37.5
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.6e-117 427.6 613 43.2
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.1e-117 427.2 619 42.3
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.1e-116 424.9 601 41.9
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.5e-115 421.0 611 41.2
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 7.6e-115 418.7 620 41.6
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 2.2e-114 417.2 613 41.9
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.2e-113 412.9 535 45.0
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.7e-112 410.2 578 42.4
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.3e-111 407.9 604 40.1
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 3.0e-111 406.8 474 47.0
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 3.9e-111 406.4 593 41.3
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 5.1e-111 406.0 605 41.3
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 8.7e-111 405.2 600 42.2
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-110 404.8 610 39.5
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 3.3e-110 403.3 602 40.4
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 4.3e-110 402.9 610 39.5
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.6e-109 401.0 611 40.1
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.8e-109 399.4 622 38.9
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.4e-108 397.9 610 41.1
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.4e-108 397.1 523 43.2
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 3.1e-108 396.7 594 39.2
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 3.1e-108 396.7 445 49.9
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.5e-107 392.9 610 39.2
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 2.2e-106 390.6 490 45.9
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 8.4e-106 388.7 609 39.4
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.9e-105 387.5 621 39.8
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.1e-104 384.0 589 38.4
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.7e-104 383.6 591 40.8
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.5e-104 383.3 591 40.6
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 7.9e-104 382.1 478 47.1
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 2.3e-103 380.6 621 37.8
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 4.3e-102 376.3 625 37.4
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.3e-101 374.8 603 39.3
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 4.5e-99 366.3 619 37.3
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.0e-98 365.2 520 43.7
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.7e-98 364.4 605 38.2
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.7e-98 364.4 565 39.5
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 1.1e-97 361.7 616 36.5
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.4e-97 361.3 616 36.2
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.9e-97 360.9 616 36.0
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 4.2e-97 359.8 609 38.8
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 5.5e-97 359.4 523 40.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 9.3e-97 358.6 476 42.4
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.2e-96 358.2 562 38.4
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 2.1e-96 357.5 616 35.7
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 4.6e-96 356.3 526 40.7
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.3e-95 354.8 612 36.4
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 3.9e-95 353.2 616 35.7
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 3.9e-95 353.2 557 39.0
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 3.9e-95 353.2 417 46.5
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 3.9e-95 353.2 512 42.6
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.5e-94 351.3 462 42.2
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.9e-94 350.9 613 36.7
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 4.5e-91 339.7 599 35.1
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.0e-90 338.6 436 45.0
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 2.9e-90 337.0 603 38.6
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 3.2e-89 333.6 607 32.9
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.8e-87 327.8 422 43.1
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 4.8e-85 319.7 444 40.8
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.1e-84 318.5 492 38.8
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 1.4e-84 318.2 461 42.1
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 2.4e-84 317.4 609 36.8
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.0e-82 312.0 475 40.8
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 1.6e-80 304.7 418 41.9
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 2.6e-75 287.3 453 39.7
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 1.0e-74 285.4 421 39.7
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 3.4e-62 243.8 295 44.1
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.8e-60 238.0 297 48.5
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.5e-59 233.8 281 45.2
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 4.5e-51 206.8 576 29.0
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 3.3e-49 200.7 334 35.6
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.3e-47 194.5 233 45.9
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 8.6e-42 176.0 581 26.3
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.1e-41 175.6 137 70.1
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.9e-41 174.9 128 72.7
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 7.0e-36 156.4 287 36.6
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.2e-32 145.6 254 36.2
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 1.8e-23 115.2 237 32.9
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.4e-20 105.5 408 25.5
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 3.3e-17 94.4 329 26.4
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 1.6e-16 92.0 170 38.2
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.6e-16 92.0 178 31.5
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 5.2e-15 87.0 255 27.8
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.2e-14 85.9 250 32.0
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.2e-11 75.9 137 37.2
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 6.0e-11 73.6 164 30.5
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 1.7e-10 72.0 108 37.0
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.9e-09 68.6 87 40.2


User provided reference genes

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