Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 6.7e-240 833.6 411 100.0
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 6.4e-206 720.7 466 79.2
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.1e-192 675.2 414 78.7
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 2.0e-191 672.5 458 73.6
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.6e-191 672.2 458 73.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.4e-191 671.8 460 72.8
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 5.8e-191 671.0 458 74.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 7.6e-191 670.6 444 75.0
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 7.6e-191 670.6 461 72.7
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 9.9e-191 670.2 459 72.8
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.3e-190 669.8 443 74.7
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.2e-190 669.1 453 73.5
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.2e-190 669.1 458 72.9
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.9e-190 668.7 462 72.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 3.8e-190 668.3 454 72.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.4e-189 665.6 454 72.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 4.2e-189 664.8 466 72.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 5.4e-189 664.5 456 71.7
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.4e-189 664.5 454 72.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.6e-188 662.9 457 72.4
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.1e-188 662.5 461 71.8
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.7e-188 662.1 425 75.5
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 7.8e-188 660.6 441 77.1
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.3e-187 659.8 435 74.5
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.3e-187 659.8 455 71.6
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.7e-187 659.4 461 72.0
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.7e-187 659.4 455 72.7
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.7e-187 659.4 460 72.2
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.7e-187 659.4 427 75.9
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.7e-187 659.4 438 73.1
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 2.3e-187 659.1 458 70.5
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.0e-187 658.7 457 72.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 3.0e-187 658.7 450 73.1
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.0e-187 658.7 462 71.4
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 3.0e-187 658.7 434 74.4
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 3.9e-187 658.3 445 72.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 5.1e-187 657.9 464 71.6
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.7e-187 657.1 462 71.9
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 8.7e-187 657.1 427 75.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.5e-186 656.4 455 72.7
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.3e-186 655.2 455 71.4
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 3.3e-186 655.2 441 72.3
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.3e-186 654.8 458 69.7
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.3e-186 654.8 456 70.4
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 5.6e-186 654.4 443 73.1
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 5.6e-186 654.4 440 73.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 5.6e-186 654.4 430 74.2
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 7.3e-186 654.1 461 69.8
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 9.6e-186 653.7 459 69.9
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.6e-185 652.9 456 70.4
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.8e-185 652.1 462 69.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 3.6e-185 651.7 473 69.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 4.8e-185 651.4 426 73.2
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 4.8e-185 651.4 453 71.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.8e-185 651.4 425 75.1
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 6.2e-185 651.0 457 70.2
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 6.2e-185 651.0 459 71.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 8.1e-185 650.6 427 74.2
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.4e-184 649.8 458 69.4
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.8e-184 649.4 456 71.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 9.0e-184 647.1 479 68.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.5e-183 646.4 440 71.1
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.6e-183 645.6 426 73.9
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.8e-183 644.4 425 73.2
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 7.6e-183 644.0 441 71.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.3e-182 643.3 451 70.1
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.7e-182 642.9 455 70.5
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 6.4e-182 641.0 456 71.7
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.9e-181 639.4 453 69.5
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 2.4e-181 639.0 459 69.7
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.2e-180 636.7 423 72.3
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 3.5e-180 635.2 451 72.1
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.6e-180 634.8 442 74.7
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.0e-179 633.6 448 70.1
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.0e-179 633.6 417 73.6
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.3e-179 633.3 415 74.5
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.5e-178 629.8 446 69.3
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.3e-178 628.6 429 71.3
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.1e-176 622.1 422 71.6
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.1e-173 613.6 480 66.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 9.3e-173 610.5 400 75.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 9.3e-173 610.5 454 66.3
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 7.9e-172 607.4 427 69.1
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 9.6e-170 600.5 400 73.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 9.6e-170 600.5 423 68.1
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.8e-169 599.0 392 78.3
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.4e-168 595.9 352 83.8
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.5e-167 591.7 473 64.9
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.9e-166 589.0 424 66.7
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 6.5e-166 587.8 492 63.0
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 6.0e-164 581.3 453 67.1
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.8e-161 572.4 381 75.1
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.0e-158 563.9 355 77.7
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.8e-158 562.0 488 61.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.5e-151 540.0 445 60.0
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 5.0e-150 535.0 386 68.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.4e-149 533.5 562 52.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.4e-144 516.2 424 60.6
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 5.9e-143 511.5 356 71.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.4e-141 506.9 427 58.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.0e-131 472.6 481 55.9
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.6e-130 469.5 300 77.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 8.5e-126 454.5 268 80.2
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.5e-125 453.8 376 62.5
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.1e-124 449.9 281 76.9
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 7.7e-111 404.8 379 55.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.4e-106 389.0 434 51.4
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 3.5e-103 379.4 256 75.4
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 6.3e-44 182.6 180 52.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.1e-43 179.9 100 81.0
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 4.6e-39 166.4 146 57.5
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.8e-36 157.1 146 53.4
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 7.4e-21 105.9 69 68.1
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.2e-17 94.4 57 77.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 3.2e-16 90.5 49 83.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 2.7e-15 87.4 50 82.0
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.7e-07 60.1 49 65.3
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.3e-06 57.8 46 63.0


User provided reference genes

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