Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 3.6e-200 701.4 369 100.0
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.1e-170 601.3 375 84.5
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.6e-163 579.7 393 79.6
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 6.0e-147 524.6 375 73.1
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 5.1e-146 521.5 369 75.3
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 5.9e-118 428.3 377 60.7
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 5.0e-117 425.2 376 60.9
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 1.1e-116 424.1 377 60.5
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.9e-116 423.3 379 60.4
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.9e-116 423.3 380 60.8
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.9e-116 423.3 377 59.2
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.2e-115 420.6 377 59.7
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 2.1e-115 419.9 375 60.3
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 7.9e-115 417.9 379 59.1
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 7.9e-115 417.9 379 59.6
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.0e-114 417.5 385 59.0
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 6.7e-114 414.8 380 59.7
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 3.3e-113 412.5 377 60.2
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 4.4e-113 412.1 379 59.1
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 2.8e-112 409.5 370 58.9
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 3.7e-112 409.1 376 58.8
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 4.8e-112 408.7 377 58.1
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 8.2e-112 407.9 377 59.4
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.1e-111 405.6 379 58.6
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 9.1e-111 404.4 378 59.3
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 7.7e-110 401.4 375 57.3
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.7e-109 400.2 379 58.0
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 2.2e-109 399.8 379 58.0
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 8.5e-109 397.9 378 57.4
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 4.7e-107 392.1 377 55.4
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 6.1e-107 391.7 380 56.8
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.4e-106 390.6 377 55.2
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 3.3e-105 386.0 373 56.3
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 5.7e-105 385.2 373 55.0
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 5.7e-105 385.2 377 55.2
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 1.3e-104 384.0 376 54.8
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 1.7e-104 383.6 376 55.9
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.7e-104 383.6 370 55.7
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 3.7e-104 382.5 370 55.4
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 4.8e-104 382.1 373 55.5
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.1e-103 380.9 376 56.6
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 3.1e-103 379.4 379 55.9
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 9.1e-103 377.9 374 54.8
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 5.9e-102 375.2 378 54.2
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 1.0e-101 374.4 377 55.7
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 1.3e-101 374.0 379 54.9
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.7e-101 373.6 376 54.3
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 2.2e-101 373.2 377 52.8
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.9e-101 372.9 377 53.8
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 5.0e-101 372.1 376 57.2
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 8.5e-101 371.3 380 54.2
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 1.9e-100 370.2 381 53.0
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 1.9e-100 370.2 370 55.1
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 2.7e-99 366.3 375 54.9
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 8.0e-99 364.8 376 54.0
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 4.0e-98 362.5 371 53.4
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 6.8e-98 361.7 331 59.2
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 8.8e-98 361.3 380 55.8
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.2e-97 360.9 375 53.6
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 4.4e-97 359.0 376 54.5
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 9.7e-97 357.8 381 52.5
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 1.7e-96 357.1 332 56.0
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 1.2e-94 350.9 378 52.4
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.2e-94 350.9 379 53.6
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 1.7e-93 347.1 376 53.5
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.1e-92 344.4 382 50.8
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.5e-92 344.0 380 51.3
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 3.2e-92 342.8 395 51.9
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 5.5e-92 342.0 378 52.6
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 2.7e-91 339.7 383 49.3
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 8.0e-91 338.2 382 49.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 8.0e-91 338.2 372 52.2
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 8.0e-91 338.2 382 49.5
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.4e-90 337.4 379 49.6
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 6.8e-90 335.1 390 48.7
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 7.5e-89 331.6 380 48.7
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.7e-88 329.3 380 48.4
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.7e-88 329.3 380 48.4
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.4e-87 327.4 372 51.1
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 4.1e-87 325.9 383 49.6
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 5.4e-87 325.5 385 48.3
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 2.7e-86 323.2 381 47.8
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 4.5e-86 322.4 385 47.8
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 6.6e-85 318.5 385 47.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 8.6e-85 318.2 385 47.5
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 5.5e-84 315.5 377 50.1
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 6.8e-82 308.5 384 45.8
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 2.6e-81 306.6 404 45.0
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 7.5e-81 305.1 385 44.2
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.7e-80 303.9 257 63.8
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 3.7e-80 302.8 324 52.8
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 2.7e-78 296.6 383 47.5
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 5.0e-69 265.8 259 52.9
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 2.8e-67 260.0 388 41.8
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 8.0e-67 258.5 197 65.0
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 2.0e-65 253.8 281 52.0
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 2.1e-59 233.8 310 46.5
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 3.0e-53 213.4 225 55.1
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 3.0e-53 213.4 384 35.9
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 6.4e-48 195.7 374 39.0
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 3.2e-47 193.4 162 63.0
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.7e-45 187.6 179 56.4
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.4e-42 177.9 279 41.2
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 7.6e-41 172.2 371 37.5
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.2e-40 170.6 170 58.2
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 2.2e-40 170.6 233 42.5
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 2.2e-40 170.6 369 35.8
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-37 161.8 161 56.5
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.9e-36 157.5 171 56.7
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 4.3e-36 156.4 166 54.8
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 1.7e-32 144.4 160 55.0
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 3.5e-30 136.7 159 48.4
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.1e-26 123.6 189 39.2
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 9.0e-26 122.1 189 38.6
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 7.6e-25 119.0 161 44.7
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 6.2e-19 99.4 92 52.2
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 6.2e-19 99.4 92 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 8.2e-19 99.0 164 32.9
Ah.10g037740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.5e-17 94.7 74 62.2
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 1.7e-16 91.3 72 61.1
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.5e-15 86.3 141 42.6
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.3e-12 76.6 81 45.7
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 8.2e-11 72.4 82 43.9
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.1e-10 70.1 68 50.0


User provided reference genes

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