Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 2.6e-166 588.6 286 100.0
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.7e-88 330.1 189 83.1
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 2.3e-85 319.7 240 69.2
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 5.1e-85 318.5 230 69.6
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.8e-83 312.8 206 71.8
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 4.0e-82 308.9 227 67.8
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 9.0e-82 307.8 249 62.7
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.2e-81 307.4 233 66.1
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 1.5e-81 307.0 252 62.7
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 4.4e-81 305.4 230 67.4
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 5.8e-81 305.1 200 72.0
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 7.6e-81 304.7 257 63.0
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 7.6e-81 304.7 234 66.7
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 1.7e-80 303.5 199 72.4
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.9e-80 302.8 222 68.0
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 2.9e-80 302.8 212 71.2
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 3.8e-80 302.4 226 66.4
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 3.8e-80 302.4 232 66.4
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 4.9e-80 302.0 217 68.2
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.4e-80 301.6 219 68.0
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 6.4e-80 301.6 223 67.3
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 8.4e-80 301.2 219 67.6
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.4e-80 301.2 188 76.1
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.4e-80 301.2 188 76.1
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 8.4e-80 301.2 224 64.7
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 8.4e-80 301.2 223 66.4
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 8.4e-80 301.2 201 73.1
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 1.1e-79 300.8 186 76.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.4e-79 300.4 232 65.1
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 1.4e-79 300.4 266 61.3
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 1.4e-79 300.4 229 65.5
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.4e-79 300.4 226 64.6
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.4e-79 300.4 226 64.6
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 1.9e-79 300.1 221 67.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.9e-79 300.1 215 67.4
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.4e-79 299.7 222 68.5
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 4.2e-79 298.9 263 60.8
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 4.2e-79 298.9 279 57.3
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 5.4e-79 298.5 259 62.9
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 9.3e-79 297.7 213 68.1
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 9.3e-79 297.7 186 75.8
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 9.3e-79 297.7 186 75.8
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.2e-78 297.4 263 60.5
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 1.2e-78 297.4 219 67.1
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 1.6e-78 297.0 274 59.5
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.7e-78 296.2 238 64.7
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 2.7e-78 296.2 200 69.5
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.7e-78 296.2 186 75.3
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 3.5e-78 295.8 277 56.0
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 3.5e-78 295.8 237 63.3
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 3.5e-78 295.8 236 63.1
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 3.5e-78 295.8 230 66.5
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 6.0e-78 295.0 257 60.3
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 7.9e-78 294.7 263 60.1
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 7.9e-78 294.7 177 76.8
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 7.9e-78 294.7 257 59.9
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.0e-77 294.3 261 59.4
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 2.3e-77 293.1 281 57.7
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 2.3e-77 293.1 223 65.0
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 3.0e-77 292.7 199 69.3
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 3.0e-77 292.7 225 65.8
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 1.5e-76 290.4 226 65.9
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 3.3e-76 289.3 269 58.7
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 3.3e-76 289.3 228 63.6
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 4.3e-76 288.9 189 73.0
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 7.4e-76 288.1 265 57.0
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 9.6e-76 287.7 241 63.5
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 1.3e-75 287.3 186 74.2
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 2.8e-75 286.2 263 60.1
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 3.6e-75 285.8 221 67.4
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 4.8e-75 285.4 227 63.4
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 6.2e-75 285.0 263 59.7
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 1.1e-74 284.3 263 59.3
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.1e-74 284.3 182 73.1
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 3.1e-74 282.7 199 65.3
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.0e-74 282.3 178 76.4
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 9.0e-74 281.2 236 59.7
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 3.4e-73 279.3 219 63.0
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 4.5e-73 278.9 250 59.2
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 7.6e-73 278.1 208 63.9
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.8e-69 266.9 176 72.2
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 4.8e-67 258.8 223 62.8
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 5.3e-66 255.4 218 59.6
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 7.6e-65 251.5 202 63.9
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 1.0e-64 251.1 199 62.3
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.3e-64 250.8 300 48.0
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.1e-63 247.7 265 50.2
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 3.5e-62 242.7 145 73.8
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 5.1e-61 238.8 181 61.9
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.3e-60 235.7 263 47.9
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.5e-57 227.3 176 64.2
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 7.6e-57 224.9 246 51.2
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.0e-56 224.6 159 64.8
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.2e-56 223.4 182 57.7
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 3.2e-55 219.5 159 64.2
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 3.3e-52 209.5 248 47.2
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 3.7e-51 206.1 132 71.2
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 4.8e-51 205.7 209 56.0
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.6e-46 190.7 186 55.4
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 6.3e-43 178.7 285 42.5
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 8.2e-43 178.3 112 73.2
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.4e-42 177.6 163 55.8
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 2.0e-41 173.7 111 74.8
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 7.7e-41 171.8 161 54.0
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.1e-39 167.9 107 72.9
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.1e-39 167.9 107 72.9
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 2.5e-39 166.8 161 55.3
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.2e-39 166.0 143 60.8
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.4e-39 164.9 131 64.9
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 1.8e-37 160.6 161 55.3
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 6.7e-37 158.7 112 67.0
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.3e-36 156.4 106 71.7
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 9.1e-34 148.3 93 74.2
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 4.5e-33 146.0 84 78.6
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.8e-32 142.9 93 72.0
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 1.9e-31 140.6 83 75.9
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 4.0e-21 106.3 135 45.2
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 2.2e-19 100.5 179 36.3
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.3e-19 98.6 61 73.8
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 2.5e-15 87.0 93 48.4


User provided reference genes

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