Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04208 Beta vulgaris HOM05D000989 ORTHO05D001287 1.7e-38 162.2 79 100.0
EL10As18g24158 Beta vulgaris HOM05D000989 ORTHO05D001287 1.9e-29 132.1 65 95.4
Ah.04g154120 Amaranthus hybridus HOM05D000989 ORTHO05D001287 1.2e-12 76.3 61 57.4
Hund24920 Selenicereus undatus HOM05D000989 ORTHO05D001287 2.5e-10 68.6 62 59.7
AUR62040381 Chenopodium quinoa HOM05D000989 ORTHO05D001287 4.3e-10 67.8 55 63.6
C01p28870 Brassica napus HOM05D000989 ORTHO05D001287 5.6e-10 67.4 64 53.1
Thhalv10020751m.g Eutrema salsugineum HOM05D000989 ORTHO05D001287 1.6e-09 65.9 69 53.6
Lalb_Chr09g0320041 Lupinus albus HOM05D000989 ORTHO05D001287 1.6e-09 65.9 62 51.6
BcaNung00365 Brassica carinata HOM05D000989 ORTHO05D001287 2.1e-09 65.5 64 50.0
BcaC09g50112 Brassica carinata HOM05D000989 ORTHO05D001287 3.7e-09 64.7 64 51.6
BolC1t02815H Brassica oleracea HOM05D000989 ORTHO05D001287 3.7e-09 64.7 64 51.6
Prupe.1G030900 Prunus persica HOM05D000989 ORTHO05D001287 4.8e-09 64.3 69 50.7
GSVIVG01018120001 Vitis vinifera HOM05D000989 ORTHO05D001287 4.8e-09 64.3 53 60.4
MD13G1207400 Malus domestica HOM05D000989 ORTHO05D001287 6.2e-09 63.9 55 60.0
MD16G1209000 Malus domestica HOM05D000989 ORTHO05D001287 6.2e-09 63.9 55 60.0
Manes.03G168700 Manihot esculenta HOM05D000989 ORTHO05D001287 1.1e-08 63.2 57 56.1
Solyc06g053790.3 Solanum lycopersicum HOM05D000989 ORTHO05D001287 1.1e-08 63.2 56 51.8
Sopen06g018910 Solanum pennellii HOM05D000989 ORTHO05D001287 1.1e-08 63.2 56 51.8
AT4G14500 Arabidopsis thaliana HOM05D000989 ORTHO05D001287 1.4e-08 62.8 64 54.7
Sp3g20760 Schrenkiella parvula HOM05D000989 ORTHO05D001287 1.4e-08 62.8 59 50.8
Carub.0007s2772 Capsella rubella HOM05D000989 ORTHO05D001287 1.8e-08 62.4 62 54.8
Haze_11301 Corylus avellana HOM05D000989 ORTHO05D001287 1.8e-08 62.4 54 53.7
Cfa008378 Carpinus fangiana HOM05D000989 ORTHO05D001287 2.4e-08 62.0 54 51.9
Sp7g12580 Schrenkiella parvula HOM05D000989 ORTHO05D001287 2.4e-08 62.0 52 57.7
BcaB06g26437 Brassica carinata HOM05D000989 ORTHO05D001287 3.1e-08 61.6 53 50.9
CARHR098990 Cardamine hirsuta HOM05D000989 ORTHO05D001287 4.0e-08 61.2 53 58.5
Haze_11303 Corylus avellana HOM05D000989 ORTHO05D001287 4.0e-08 61.2 54 51.9
MELO3C006468.2 Cucumis melo HOM05D000989 ORTHO05D001287 4.0e-08 61.2 45 60.0
CsaV3_3G012570 Cucumis sativus L. HOM05D000989 ORTHO05D001287 4.0e-08 61.2 45 60.0
Potri.008G162600 Populus trichocarpa HOM05D000989 ORTHO05D001287 4.0e-08 61.2 49 55.1
THA.LOC104804749 Tarenaya hassleriana HOM05D000989 ORTHO05D001287 4.0e-08 61.2 38 73.7
AL7G41630 Arabidopsis lyrata HOM05D000989 ORTHO05D001287 5.3e-08 60.8 35 77.1
Eucgr.H03157 Eucalyptus grandis HOM05D000989 ORTHO05D001287 5.3e-08 60.8 35 77.1
Nitab4.5_0012794g0010 Nicotiana tabacum HOM05D000989 ORTHO05D001287 5.3e-08 60.8 59 49.2
Sed0019938 Sechium edule HOM05D000989 ORTHO05D001287 5.3e-08 60.8 45 60.0
BcaB04g18227 Brassica carinata HOM05D000989 ORTHO05D001287 6.9e-08 60.5 35 74.3
BcaC07g37823 Brassica carinata HOM05D000989 ORTHO05D001287 6.9e-08 60.5 35 74.3
A01p32010 Brassica napus HOM05D000989 ORTHO05D001287 6.9e-08 60.5 44 61.4
A08p11150 Brassica napus HOM05D000989 ORTHO05D001287 6.9e-08 60.5 35 74.3
BolC8t48210H Brassica oleracea HOM05D000989 ORTHO05D001287 6.9e-08 60.5 35 74.3
BraA01t03326Z Brassica rapa HOM05D000989 ORTHO05D001287 6.9e-08 60.5 44 61.4
BraA08t33112Z Brassica rapa HOM05D000989 ORTHO05D001287 6.9e-08 60.5 35 74.3
CANSAT78G0202 Cannabis sativa HOM05D000989 ORTHO05D001287 6.9e-08 60.5 44 61.4
Cpa.g.sc58.49 Carica papaya HOM05D000989 ORTHO05D001287 6.9e-08 60.5 54 55.6
Hma1.2p1_0650F.1_g195430 Hydrangea macrophylla HOM05D000989 ORTHO05D001287 9.0e-08 60.1 61 52.5
Oeu008794.2 Olea europaea HOM05D000989 ORTHO05D001287 9.0e-08 60.1 53 50.9
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 9.0e-08 60.1 50 58.0
TWI09G0018 Tripterygium wilfordii HOM05D000989 ORTHO05D001287 9.0e-08 60.1 38 71.1
BcaC09g49244 Brassica carinata HOM05D000989 ORTHO05D001287 1.2e-07 59.7 44 61.4
C01p41010 Brassica napus HOM05D000989 ORTHO05D001287 1.2e-07 59.7 44 61.4
BolC1t04051H Brassica oleracea HOM05D000989 ORTHO05D001287 1.2e-07 59.7 44 61.4
LjContig00222g0016598 Lotus japonicus HOM05D000989 ORTHO05D001287 1.2e-07 59.7 55 56.4
BcaB04g20473 Brassica carinata HOM05D000989 ORTHO05D001287 1.5e-07 59.3 65 46.2
CiPaw.02G116200 Carya illinoinensis HOM05D000989 ORTHO05D001287 1.5e-07 59.3 52 55.8
Thhalv10025252m.g Eutrema salsugineum HOM05D000989 ORTHO05D001287 1.5e-07 59.3 54 59.3
Gohir.A09G057500 Gossypium hirsutum HOM05D000989 ORTHO05D001287 1.5e-07 59.3 56 50.0
Gohir.D09G056700 Gossypium hirsutum HOM05D000989 ORTHO05D001287 1.5e-07 59.3 56 50.0
Gorai.006G070300 Gossypium raimondii HOM05D000989 ORTHO05D001287 1.5e-07 59.3 56 50.0
QL06p015767 Quercus lobata HOM05D000989 ORTHO05D001287 1.5e-07 59.3 55 54.5
QL93p0113_0031 Quercus lobata HOM05D000989 ORTHO05D001287 1.5e-07 59.3 55 54.5
Sabra08G0124000 Salix brachista HOM05D000989 ORTHO05D001287 1.5e-07 59.3 44 59.1
Sc13g0006000 Simmondsia chinensis HOM05D000989 ORTHO05D001287 1.5e-07 59.3 40 65.0
PGSC0003DMG400016320 Solanum tuberosum HOM05D000989 ORTHO05D001287 1.5e-07 59.3 59 47.5
Actinidia04477 Actinidia chinensis HOM05D000989 ORTHO05D001287 2.0e-07 58.9 56 48.2
Aa31LG8G9560 Aethionema arabicum HOM05D000989 ORTHO05D001287 2.0e-07 58.9 38 71.1
arahy.Tifrunner.gnm1.ann1.3J84P5 Arachis hypogaea HOM05D000989 ORTHO05D001287 2.0e-07 58.9 43 62.8
Carub.0003s2325 Capsella rubella HOM05D000989 ORTHO05D001287 2.0e-07 58.9 55 52.7
Ca_24426_v3 Cicer arietinum L. HOM05D000989 ORTHO05D001287 2.0e-07 58.9 58 53.4
Dinv29909 Davidia involucrata HOM05D000989 ORTHO05D001287 2.0e-07 58.9 40 65.0
Gohir.D01G022200 Gossypium hirsutum HOM05D000989 ORTHO05D001287 2.0e-07 58.9 56 55.4
Thecc.04G246300 Theobroma cacao HOM05D000989 ORTHO05D001287 2.0e-07 58.9 56 51.8
vmacro08413 Vaccinium macrocarpon HOM05D000989 ORTHO05D001287 2.0e-07 58.9 62 46.8
FvH4_4g02700 Fragaria vesca HOM05D000989 ORTHO05D001287 2.6e-07 58.5 43 62.8
FAN12G1302 Fragaria x ananassa HOM05D000989 ORTHO05D001287 2.6e-07 58.5 43 62.8
Hma1.2p1_1276F.1_g272200 Hydrangea macrophylla HOM05D000989 ORTHO05D001287 2.6e-07 58.5 48 62.5
ClCG05G004590 Citrullus lanatus HOM05D000989 ORTHO05D001287 3.4e-07 58.2 56 50.0
Gohir.A01G024200 Gossypium hirsutum HOM05D000989 ORTHO05D001287 3.4e-07 58.2 56 55.4
Nn3g19541 Nelumbo nucifera HOM05D000989 ORTHO05D001287 3.4e-07 58.2 55 56.4
Atru.chr4.2228 Acer truncatum HOM05D000989 ORTHO05D001287 4.5e-07 57.8 56 55.4
Duzib212G0433 Durio zibethinus HOM05D000989 ORTHO05D001287 4.5e-07 57.8 56 50.0
FAN22G1634 Fragaria x ananassa HOM05D000989 ORTHO05D001287 4.5e-07 57.8 53 52.8
Gorai.002G024700 Gossypium raimondii HOM05D000989 ORTHO05D001287 4.5e-07 57.8 56 53.6
Lalb_Chr05g0211171 Lupinus albus HOM05D000989 ORTHO05D001287 4.5e-07 57.8 57 50.9
Nitab4.5_0007409g0010 Nicotiana tabacum HOM05D000989 ORTHO05D001287 4.5e-07 57.8 56 51.8
arahy.Tifrunner.gnm1.ann1.94SB72 Arachis hypogaea HOM05D000989 ORTHO05D001287 5.8e-07 57.4 40 65.0
CARHR220720 Cardamine hirsuta HOM05D000989 ORTHO05D001287 5.8e-07 57.4 56 53.6
Glyma.01G234700 Glycine max HOM05D000989 ORTHO05D001287 5.8e-07 57.4 57 57.9
Duzib052G0107 Durio zibethinus HOM05D000989 ORTHO05D001287 9.9e-07 56.6 58 46.6
COL.COLO4_15793 Corchorus olitorius HOM05D000989 ORTHO05D001287 1.3e-06 56.2 62 54.8
FAN17G2115 Fragaria x ananassa HOM05D000989 ORTHO05D001287 1.3e-06 56.2 63 47.6
Psat2g189760 Pisum sativum HOM05D000989 ORTHO05D001287 1.3e-06 56.2 54 48.1
unitig_32.g10830 Utricularia gibba HOM05D000989 ORTHO05D001287 1.3e-06 56.2 51 51.0
Ciclev10005003m.g Citrus clementina HOM05D000989 ORTHO05D001287 1.7e-06 55.8 54 51.9
Glyma.11G008200 Glycine max HOM05D000989 ORTHO05D001287 1.7e-06 55.8 56 57.1
MBI11_g20621_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D001287 1.7e-06 55.8 54 46.3
Phvul.002G042100 Phaseolus vulgaris HOM05D000989 ORTHO05D001287 1.7e-06 55.8 57 52.6
TWI73G1262 Tripterygium wilfordii HOM05D000989 ORTHO05D001287 1.7e-06 55.8 56 55.4
VMungo1215G3141 Vigna mungo HOM05D000989 ORTHO05D001287 1.7e-06 55.8 40 60.0
CSS0020273 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D001287 2.2e-06 55.5 40 62.5
CSS0031702 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D001287 2.2e-06 55.5 40 62.5
Lj6A657G46 Lonicera japonica HOM05D000989 ORTHO05D001287 2.2e-06 55.5 40 62.5
Aqoxy5G00318 Aquilegia oxysepala HOM05D000989 ORTHO05D001287 2.9e-06 55.1 40 60.0
Potri.010G076500 Populus trichocarpa HOM05D000989 ORTHO05D001287 2.9e-06 55.1 50 58.0
Medtr5g007030 Medicago truncatula HOM05D000989 ORTHO05D001287 4.9e-06 54.3 53 50.9
Peaxi162Scf00325g00099 Petunia axillaris HOM05D000989 ORTHO05D001287 4.9e-06 54.3 59 49.2
RcHm_v2.0_Chr4g0390521 Rosa chinensis HOM05D000989 ORTHO05D001287 4.9e-06 54.3 32 75.0
TPR.G38035 Trifolium pratense HOM05D000989 ORTHO05D001287 4.9e-06 54.3 54 51.9
Rhsim04G0190200 Rhododendron simsii HOM05D000989 ORTHO05D001287 6.4e-06 53.9 62 46.8
SHI00597 Sapria himalayana HOM05D000989 ORTHO05D001287 6.4e-06 53.9 37 64.9
AL3G37520 Arabidopsis lyrata HOM05D000989 ORTHO05D001287 8.4e-06 53.5 49 55.1
Sed0017163 Sechium edule HOM05D000989 ORTHO05D001287 8.4e-06 53.5 53 50.9
THA.LOC104808596 Tarenaya hassleriana HOM05D000989 ORTHO05D001287 8.4e-06 53.5 64 51.6


User provided reference genes

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