Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 0.0e+00 1402.5 722 100.0
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.8e-248 862.8 656 70.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.2e-230 802.7 526 80.4
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.3e-209 731.5 706 55.7
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.8e-196 689.5 658 55.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.6e-172 610.5 678 48.2
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 3.0e-166 589.7 670 47.8
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.4e-163 580.9 667 47.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.9e-161 573.2 663 47.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.8e-161 572.8 653 47.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 3.2e-160 569.7 665 47.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 7.9e-159 565.1 723 45.2
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 1.0e-158 564.7 658 46.0
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.1e-156 557.0 663 45.6
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 4.8e-156 555.8 690 44.6
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.1e-155 554.7 664 45.5
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.1e-155 553.1 659 46.0
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.2e-154 551.2 649 47.5
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 2.2e-153 547.0 677 45.3
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 2.2e-153 547.0 662 46.5
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 8.4e-153 545.0 661 46.0
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.1e-152 544.7 664 45.6
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.5e-152 543.5 662 44.7
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.7e-151 540.0 667 44.1
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 6.0e-151 538.9 654 45.3
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 5.1e-150 535.8 652 50.6
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.5e-149 533.5 674 44.4
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 5.7e-149 532.3 671 44.6
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 2.4e-147 526.9 654 44.3
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 9.0e-147 525.0 645 45.3
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 9.0e-147 525.0 663 44.3
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 3.4e-146 523.1 651 44.7
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 5.8e-146 522.3 659 45.1
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 2.2e-145 520.4 655 43.7
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.8e-145 519.6 672 43.8
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 6.5e-145 518.8 655 43.5
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 8.4e-145 518.5 652 44.2
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 8.4e-145 518.5 653 44.1
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 2.5e-144 516.9 651 44.7
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 4.2e-144 516.2 719 42.7
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 9.3e-144 515.0 674 44.1
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 6.1e-143 512.3 677 42.5
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.3e-142 511.1 677 42.8
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 2.3e-142 510.4 661 43.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 3.3e-141 506.5 652 43.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 4.3e-141 506.1 677 42.5
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.3e-141 506.1 673 43.4
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 5.7e-141 505.8 669 43.3
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 1.4e-136 491.1 612 45.1
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.4e-136 491.1 656 44.8
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 2.1e-135 487.3 639 42.6
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.6e-135 486.5 656 40.5
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 3.6e-135 486.5 649 41.1
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 8.8e-134 481.9 654 43.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.5e-133 480.3 646 43.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-130 471.1 682 41.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.7e-129 467.6 652 41.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.2e-127 461.5 647 41.7
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.6e-127 461.1 653 41.8
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.5e-125 454.5 662 41.5
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.6e-125 453.8 659 42.3
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 5.7e-125 452.6 665 39.7
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.3e-124 451.4 636 42.8
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 7.7e-122 442.2 657 37.6
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.1e-120 438.3 630 41.3
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 5.5e-120 436.0 652 39.4
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 5.5e-120 436.0 536 46.1
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.6e-119 434.5 643 39.5
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.1e-117 428.3 664 38.6
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.7e-116 424.5 666 38.9
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 5.9e-114 416.0 656 39.0
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.2e-111 408.3 657 37.7
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.3e-110 404.1 705 35.6
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.8e-108 397.1 537 42.6
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 3.7e-108 396.7 666 36.6
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.1e-107 395.2 538 40.9
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 2.0e-106 391.0 669 35.6
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 7.7e-106 389.0 419 48.4
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.7e-105 387.9 667 36.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.7e-105 387.9 667 34.9
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.1e-104 385.2 677 35.7
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.9e-104 384.4 500 43.8
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 6.8e-102 375.9 661 36.3
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.2e-101 375.2 676 35.4
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.7e-100 371.3 426 47.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.2e-100 370.9 666 35.4
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 8.3e-100 369.0 668 34.6
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.2e-98 365.2 656 34.0
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 4.2e-96 356.7 543 38.3
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 4.2e-96 356.7 392 46.9
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.2e-96 356.7 677 33.4
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-90 338.6 437 43.5
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.8e-90 335.9 437 43.7
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 6.6e-89 332.8 635 34.0
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.0e-87 325.9 437 43.0
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.1e-79 299.3 437 40.3
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 9.2e-75 285.8 621 32.5
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 6.2e-71 273.1 393 40.7
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 4.3e-64 250.4 504 31.7
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.3e-56 224.2 477 33.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 9.0e-54 216.1 339 40.7
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 3.9e-49 200.7 350 36.9
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 3.4e-37 161.0 265 34.3
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.9e-35 155.2 225 38.7
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 4.2e-35 154.1 163 47.2
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.9e-32 145.2 158 48.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 5.3e-30 137.1 576 25.2
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.5e-29 135.6 585 22.4
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 2.0e-29 135.2 703 23.2
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.4e-29 134.4 637 22.4
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 2.9e-28 131.3 661 23.8
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 5.1e-25 120.6 182 39.0
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.5e-20 103.2 70 64.3
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 3.2e-19 101.3 96 55.2
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 5.3e-14 84.0 104 44.2
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.7e-12 79.0 134 35.1
EL10Ac9g21717 Beta vulgaris HOM05D000096 ORTHO05D018534 1.2e-10 72.8 35 100.0
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 9.7e-08 63.2 69 43.5
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 4.1e-06 57.8 82 40.2


User provided reference genes

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