Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 2.9e-137 491.9 248 100.0
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 1.5e-130 469.5 248 96.0
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 8.0e-103 377.5 250 72.4
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.6e-98 363.2 229 76.4
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.6e-98 363.2 221 78.3
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 1.2e-74 283.9 208 63.9
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 2.1e-74 283.1 208 64.4
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 2.1e-74 283.1 221 61.5
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 6.0e-74 281.6 208 64.9
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 6.0e-74 281.6 218 63.8
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 7.8e-74 281.2 215 61.4
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 7.8e-74 281.2 221 60.6
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 1.0e-73 280.8 208 64.4
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 5.1e-73 278.5 216 63.4
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 5.1e-73 278.5 213 64.8
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 5.1e-73 278.5 216 63.0
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 6.6e-73 278.1 219 61.2
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 4.3e-72 275.4 213 62.4
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 2.8e-71 272.7 208 63.9
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 3.6e-71 272.3 216 58.8
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 4.7e-71 271.9 216 62.0
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 6.2e-71 271.6 208 61.5
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 8.1e-71 271.2 204 63.2
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 1.1e-70 270.8 234 59.4
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 1.4e-70 270.4 208 63.5
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 1.4e-70 270.4 219 60.7
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 1.8e-70 270.0 216 61.6
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 4.0e-70 268.9 222 59.9
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 4.0e-70 268.9 223 60.5
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 5.2e-70 268.5 226 60.2
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 5.2e-70 268.5 216 59.3
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 5.2e-70 268.5 210 62.4
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 6.8e-70 268.1 227 57.3
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 1.5e-69 266.9 219 59.8
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 2.0e-69 266.5 214 58.9
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 2.6e-69 266.2 218 60.6
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 3.4e-69 265.8 237 56.5
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 4.4e-69 265.4 209 60.8
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 4.4e-69 265.4 219 56.2
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 5.8e-69 265.0 234 56.8
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 9.9e-69 264.2 211 60.2
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 1.7e-68 263.5 206 63.1
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 1.7e-68 263.5 218 57.3
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 2.2e-68 263.1 208 61.1
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 2.9e-68 262.7 208 61.1
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 3.7e-68 262.3 217 59.0
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 4.9e-68 261.9 208 61.1
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 4.9e-68 261.9 219 57.1
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 6.4e-68 261.5 235 53.6
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 8.3e-68 261.2 228 58.3
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 1.1e-67 260.8 219 58.0
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 1.1e-67 260.8 208 60.6
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 1.9e-67 260.0 204 63.2
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 5.4e-67 258.5 217 58.1
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 7.1e-67 258.1 204 62.7
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 1.2e-66 257.3 210 60.0
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 1.6e-66 256.9 208 59.6
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.6e-66 256.9 204 62.3
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 6.0e-66 255.0 214 59.8
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 7.8e-66 254.6 204 59.3
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 1.0e-65 254.2 209 57.9
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 2.3e-65 253.1 217 57.1
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 3.0e-65 252.7 209 56.5
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 6.6e-65 251.5 210 59.0
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 6.6e-65 251.5 203 57.1
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 1.5e-64 250.4 227 57.3
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 4.3e-64 248.8 234 56.8
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 2.8e-63 246.1 210 57.6
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 8.9e-62 241.1 205 59.0
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 1.5e-61 240.4 217 53.9
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.3e-60 237.3 216 55.6
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 4.2e-59 232.3 196 58.2
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 7.8e-58 228.0 208 55.3
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.5e-56 223.0 216 53.7
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.5e-56 223.0 226 52.7
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 2.1e-55 219.9 224 50.0
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 2.8e-55 219.5 222 50.9
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 1.2e-53 214.2 233 46.8
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 6.4e-52 208.4 197 49.7
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 3.5e-50 202.6 209 49.3
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 4.6e-50 202.2 209 49.3
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 4.6e-50 202.2 220 48.2
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 1.0e-49 201.1 208 47.6
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 3.9e-49 199.1 211 48.3
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 5.1e-49 198.7 208 48.6
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 7.3e-48 194.9 209 48.3
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 7.3e-48 194.9 241 41.5
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 7.3e-48 194.9 211 46.9
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 1.3e-47 194.1 239 45.6
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 4.0e-46 189.1 245 43.3
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 1.2e-45 187.6 239 43.9
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 1.2e-45 187.6 239 43.9
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 1.2e-45 187.6 239 43.9
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 1.5e-45 187.2 239 43.9
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 1.5e-45 187.2 239 43.9
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 2.0e-45 186.8 234 44.9
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 4.5e-45 185.7 244 43.0
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 9.9e-45 184.5 237 43.9
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 1.3e-44 184.1 236 41.5
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 3.8e-44 182.6 250 40.8
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 8.4e-44 181.4 238 42.4
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 4.2e-43 179.1 204 42.6
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 2.7e-42 176.4 238 41.2
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 7.9e-42 174.9 212 43.9
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-38 164.5 204 45.6
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 1.7e-36 157.1 110 67.3
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 6.4e-36 155.2 115 66.1
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 1.4e-35 154.1 139 56.1
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 1.9e-35 153.7 204 44.6
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 3.2e-35 152.9 118 63.6
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 6.0e-34 148.7 201 40.8
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 3.0e-33 146.4 104 67.3
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 3.0e-33 146.4 195 45.6
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-32 144.4 201 40.3
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 3.1e-30 136.3 220 35.5
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 6.5e-28 128.6 236 35.6
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 2.7e-26 123.2 213 36.2
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 1.0e-25 121.3 231 35.5
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 3.9e-25 119.4 151 43.7
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 6.7e-25 118.6 253 30.8
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 8.7e-25 118.2 246 31.7
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 1.4e-22 110.9 213 35.2
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 1.5e-21 107.5 213 33.8
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 7.9e-18 95.1 119 42.0
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 7.7e-13 78.6 271 26.2
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 2.9e-12 76.6 113 37.2
Cre06.g278187 Chlamydomonas reinhardtii HOM05D066552 ORTHO05D044319 5.0e-12 75.9 209 28.2
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 1.9e-11 73.9 124 39.5
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 4.2e-11 72.8 126 38.1
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 2.1e-10 70.5 154 27.3
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 7.9e-10 68.6 57 52.6
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 1.4e-09 67.8 59 47.5


User provided reference genes

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