Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 6.6e-100 367.9 258 100.0
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 6.7e-44 181.8 216 75.9
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 7.4e-43 178.3 216 74.5
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 9.7e-43 177.9 216 66.2
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.0e-36 156.4 209 63.6
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.0e-31 141.4 234 55.1
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 5.0e-31 139.0 215 56.7
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.1e-29 133.7 219 64.8
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 4.7e-29 132.5 215 63.7
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 4.7e-29 132.5 215 59.1
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 4.7e-29 132.5 215 61.9
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 6.1e-29 132.1 215 58.1
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 7.9e-29 131.7 215 57.7
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.0e-28 131.3 215 61.4
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.0e-28 131.3 217 54.8
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 1.8e-28 130.6 214 56.1
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 8.8e-28 128.3 215 35.3
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 2.6e-27 126.7 200 69.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 4.4e-27 125.9 197 56.9
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 5.7e-27 125.6 198 65.7
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 7.4e-27 125.2 220 46.4
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 7.4e-27 125.2 263 31.2
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 7.4e-27 125.2 218 53.2
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 7.4e-27 125.2 220 54.1
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.3e-26 124.4 215 54.4
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 2.2e-26 123.6 218 42.7
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.7e-26 122.9 203 47.8
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 6.3e-26 122.1 234 55.6
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 6.3e-26 122.1 200 55.5
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 8.2e-26 121.7 215 54.0
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 8.2e-26 121.7 373 43.4
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 1.1e-25 121.3 218 53.2
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.1e-25 121.3 218 53.7
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.4e-25 120.9 198 62.6
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 1.4e-25 120.9 215 51.6
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 1.8e-25 120.6 218 54.6
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 2.4e-25 120.2 233 31.8
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.4e-25 120.2 198 64.6
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 2.4e-25 120.2 203 57.1
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 3.1e-25 119.8 218 53.2
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 5.3e-25 119.0 215 50.2
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 7.0e-25 118.6 197 65.5
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 7.0e-25 118.6 197 65.5
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 7.0e-25 118.6 203 56.7
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 7.0e-25 118.6 214 54.2
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 7.0e-25 118.6 106 55.7
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 9.1e-25 118.2 198 53.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 9.1e-25 118.2 215 60.5
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 1.2e-24 117.9 230 50.0
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.2e-24 117.9 218 53.7
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.2e-24 117.9 105 55.2
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.6e-24 117.5 216 62.5
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 2.0e-24 117.1 215 54.0
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.0e-24 117.1 198 65.2
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 2.6e-24 116.7 198 36.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.6e-24 116.7 203 57.6
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 3.5e-24 116.3 216 62.0
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 5.9e-24 115.5 197 54.8
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 7.7e-24 115.2 199 51.3
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.0e-23 114.8 234 49.1
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.0e-23 114.8 215 50.2
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.3e-23 114.4 249 51.8
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.3e-23 114.4 249 51.8
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.3e-23 114.4 203 50.2
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.7e-23 114.0 198 62.6
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 2.2e-23 113.6 104 52.9
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.8e-23 112.8 249 51.8
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 5.0e-23 112.5 215 54.4
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 6.5e-23 112.1 197 58.4
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 8.5e-23 111.7 104 53.8
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 8.5e-23 111.7 106 50.9
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.5e-23 111.7 394 35.3
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.5e-23 111.7 394 35.3
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.9e-22 110.5 250 51.6
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.9e-22 110.5 215 59.1
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.5e-22 110.2 216 49.5
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 3.2e-22 109.8 369 39.6
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 3.2e-22 109.8 234 51.7
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 3.2e-22 109.8 234 51.7
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 4.2e-22 109.4 231 51.1
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 4.2e-22 109.4 186 58.6
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 4.2e-22 109.4 215 60.0
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 4.2e-22 109.4 106 50.0
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 5.5e-22 109.0 196 64.3
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 9.4e-22 108.2 105 50.5
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.4e-22 108.2 105 51.4
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.2e-21 107.8 215 58.6
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.1e-21 107.1 104 49.0
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 3.6e-21 106.3 198 63.1
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 4.7e-21 105.9 197 60.4
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 6.1e-21 105.5 215 46.5
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 6.1e-21 105.5 216 50.0
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 8.0e-21 105.1 215 46.5
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.4e-20 104.4 215 57.7
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 1.8e-20 104.0 186 63.4
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 5.2e-20 102.4 217 51.6
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.0e-19 100.5 109 46.8
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.1e-17 93.2 239 47.3
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.3e-15 87.8 234 26.5
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 5.0e-15 85.9 186 61.3
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.7e-13 80.1 182 49.5
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.7e-10 70.9 179 48.0
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.8e-10 69.3 165 55.2
Actinidia05956 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.4e-09 67.0 40 77.5
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.1e-09 66.6 106 32.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 2.9e-07 60.1 218 30.3
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 5.0e-07 59.3 102 33.3
vmacro05905 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.9e-06 57.4 40 62.5
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 7.2e-06 55.5 31 77.4


User provided reference genes

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