Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g03065 Beta vulgaris HOM05D000806 ORTHO05D002320 1.1e-43 179.5 87 100.0
Lalb_Chr23g0274531 Lupinus albus HOM05D000806 ORTHO05D002320 1.4e-09 66.2 49 71.4
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-09 65.9 49 71.4
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-09 65.9 49 71.4
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-09 65.9 49 71.4
Gohir.A07G167012 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-09 65.9 49 71.4
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 2.4e-09 65.5 49 71.4
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 2.4e-09 65.5 49 71.4
Lsat_1_v5_gn_9_98941 Lactuca sativa HOM05D000806 ORTHO05D002320 3.1e-09 65.1 41 80.5
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 3.1e-09 65.1 49 71.4
Lalb_Chr11g0071601 Lupinus albus HOM05D000806 ORTHO05D002320 4.0e-09 64.7 41 80.5
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 6.9e-09 63.9 49 69.4
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 6.9e-09 63.9 49 69.4
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
CAN.G1897.7 Capsicum annuum HOM05D000806 ORTHO05D002320 6.9e-09 63.9 40 80.0
CAN.G3.25 Capsicum annuum HOM05D000806 ORTHO05D002320 6.9e-09 63.9 40 80.0
CAN.G653.1 Capsicum annuum HOM05D000806 ORTHO05D002320 6.9e-09 63.9 40 80.0
CAN.G793.44 Capsicum annuum HOM05D000806 ORTHO05D002320 6.9e-09 63.9 40 80.0
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 6.9e-09 63.9 45 71.1
AUR62006476 Chenopodium quinoa HOM05D000806 ORTHO05D002320 6.9e-09 63.9 49 69.4
AUR62032522 Chenopodium quinoa HOM05D000806 ORTHO05D002320 6.9e-09 63.9 49 69.4
AUR62041919 Chenopodium quinoa HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
AUR62042261 Chenopodium quinoa HOM05D000806 ORTHO05D002324 6.9e-09 63.9 49 69.4
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 6.9e-09 63.9 49 69.4
Prupe.7G029700 Prunus persica HOM05D000806 ORTHO05D002320 6.9e-09 63.9 49 69.4
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 9.0e-09 63.5 49 67.3
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 9.0e-09 63.5 39 82.1
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 9.0e-09 63.5 39 82.1
ECA236G1817 Erigeron canadensis HOM05D000806 ORTHO05D000001 9.0e-09 63.5 39 82.1
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
Lsat_1_v5_gn_8_144641 Lactuca sativa HOM05D000806 ORTHO05D002320 9.0e-09 63.5 39 82.1
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 9.0e-09 63.5 49 69.4
RcHm_v2.0_Chr5g0042991 Rosa chinensis HOM05D000806 ORTHO05D002320 9.0e-09 63.5 49 69.4
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 9.0e-09 63.5 49 69.4
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 9.0e-09 63.5 49 69.4
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 9.0e-09 63.5 49 69.4
Eucgr.E02609 Eucalyptus grandis HOM05D000806 ORTHO05D002320 1.2e-08 63.2 49 69.4
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.2e-08 63.2 49 67.3
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.2e-08 63.2 49 69.4
Gorai.004G276900 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.5e-08 62.8 49 67.3
MD02G1049400 Malus domestica HOM05D000806 ORTHO05D002320 1.5e-08 62.8 34 91.2
VMungo0251G1963 Vigna mungo HOM05D000806 ORTHO05D010715 1.5e-08 62.8 34 91.2
EL10As12g24027 Beta vulgaris HOM05D000806 ORTHO05D002320 2.0e-08 62.4 49 67.3
Cpa.g.sc0.171 Carica papaya HOM05D000806 ORTHO05D002320 2.0e-08 62.4 49 67.3
Gohir.D04G104048 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.6e-08 62.0 48 68.8
Cc00_g01670 Coffea canephora HOM05D000806 ORTHO05D002320 3.4e-08 61.6 45 66.7
Cc11_g02210 Coffea canephora HOM05D000806 ORTHO05D002320 3.4e-08 61.6 45 66.7
MELO3C001225.2 Cucumis melo HOM05D000806 ORTHO05D002320 3.4e-08 61.6 39 79.5
MELO3C027978.2 Cucumis melo HOM05D000806 ORTHO05D002320 3.4e-08 61.6 39 79.5
Nitab4.5_0000138g0260 Nicotiana tabacum HOM05D000806 ORTHO05D002320 3.4e-08 61.6 51 60.8
CAN.G1012.2 Capsicum annuum HOM05D000806 ORTHO05D002320 5.8e-08 60.8 40 75.0
Cpa.g.sc120.42 Carica papaya HOM05D000806 ORTHO05D002320 5.8e-08 60.8 49 67.3
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 5.8e-08 60.8 49 65.3
Potri.005G150200 Populus trichocarpa HOM05D000806 ORTHO05D002320 5.8e-08 60.8 48 66.7
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 5.8e-08 60.8 40 77.5
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea HOM05D000806 ORTHO05D002320 9.9e-08 60.1 40 75.0
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.3e-07 59.7 48 66.7
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.3e-07 59.7 49 67.3
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.3e-07 59.7 49 67.3
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.3e-07 59.7 49 67.3
HPP92_028392 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.3e-07 59.7 47 66.0
HPP92_028399 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.3e-07 59.7 47 66.0
HPP92_028409 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.3e-07 59.7 47 66.0
Lj1g0000993 Lotus japonicus HOM05D000806 ORTHO05D002320 2.2e-07 58.9 49 65.3
SGA_v2.0_scaffold255G45490 Striga asiatica HOM05D000806 ORTHO05D002320 2.2e-07 58.9 40 72.5
Nn3g19983 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.9e-07 57.8 38 68.4
Lsat_1_v5_gn_7_98301 Lactuca sativa HOM05D000806 ORTHO05D002320 6.4e-07 57.4 56 57.1
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 6.4e-07 57.4 49 61.2
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 8.4e-07 57.0 49 63.3
SEGI_31685 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 8.4e-07 57.0 45 60.0
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.1e-06 56.6 41 68.3
Solyc04g039820.3 Solanum lycopersicum HOM05D000806 ORTHO05D002320 1.1e-06 56.6 36 77.8
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
BcaC04g21638 Brassica carinata HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 1.4e-06 56.2 39 74.4
SEGI_26932 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 1.4e-06 56.2 45 60.0
Phvul.006G066900 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 1.9e-06 55.8 33 81.8
Hund08023 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.9e-06 55.8 34 82.4
arahy.Tifrunner.gnm1.ann1.AG95Q9 Arachis hypogaea HOM05D000806 ORTHO05D002320 2.4e-06 55.5 41 63.4
EL10As5g23489 Beta vulgaris HOM05D002547 ORTHO05D002649 2.4e-06 55.5 37 78.4
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 2.4e-06 55.5 39 74.4
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 2.4e-06 55.5 39 74.4
Nitab4.5_0009663g0040 Nicotiana tabacum HOM05D000806 ORTHO05D002320 5.4e-06 54.3 39 71.8
Psat2g111000 Pisum sativum HOM05D000806 ORTHO05D002320 5.4e-06 54.3 39 71.8
Hund04050 Selenicereus undatus HOM05D000806 ORTHO05D002320 5.4e-06 54.3 34 79.4
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 7.1e-06 53.9 39 71.8
CARHR116860 Cardamine hirsuta HOM05D000806 ORTHO05D002320 7.1e-06 53.9 38 71.1
Psat5g286240 Pisum sativum HOM05D000806 ORTHO05D002320 7.1e-06 53.9 38 73.7
Hund07992 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund08809 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund19838 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund22772 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27485 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27490 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27570 Selenicereus undatus HOM05D000680 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27599 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27874 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27955 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund27977 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28101 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28473 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28492 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28511 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28624 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28670 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28738 Selenicereus undatus HOM05D000680 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28748 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund28838 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29142 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29363 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29462 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29637 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29805 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29828 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund29868 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30328 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30362 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30468 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30508 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30560 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
Hund30896 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.1e-06 53.9 34 79.4
ClCG01G001030 Citrullus lanatus HOM05D000806 ORTHO05D002320 9.3e-06 53.5 33 78.8
MD02G1213300 Malus domestica HOM05D000806 ORTHO05D002320 9.3e-06 53.5 30 86.7
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 9.3e-06 53.5 46 58.7


User provided reference genes

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