Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02840 Beta vulgaris HOM05D000611 ORTHO05D000809 2.7e-48 194.9 90 100.0
EL10Ac2g02839 Beta vulgaris HOM05D000611 ORTHO05D000809 4.3e-30 134.4 89 74.2
EL10Ac2g02837 Beta vulgaris HOM05D000611 ORTHO05D000809 6.2e-29 130.6 70 85.7
EL10Ac8g20014 Beta vulgaris HOM05D000611 ORTHO05D000809 9.9e-19 96.7 85 60.0
EL10Ac2g02838 Beta vulgaris HOM05D000611 ORTHO05D000809 5.4e-17 90.9 65 64.6
AUR62039714 Chenopodium quinoa HOM05D000611 ORTHO05D000809 3.1e-12 75.1 55 63.6
Hund10768 Selenicereus undatus HOM05D000611 ORTHO05D000809 3.1e-12 75.1 55 63.6
AUR62036263 Chenopodium quinoa HOM05D000611 ORTHO05D000809 9.0e-12 73.6 55 61.8
Thecc.05G244900 Theobroma cacao HOM05D000611 ORTHO05D000809 1.5e-11 72.8 60 50.0
EL10Ac8g20013 Beta vulgaris HOM05D000611 ORTHO05D000809 4.4e-11 71.2 59 59.3
arahy.Tifrunner.gnm1.ann1.DX8RYA Arachis hypogaea HOM05D000611 ORTHO05D000809 7.6e-11 70.5 59 49.2
Duzib128G1685 Durio zibethinus HOM05D000611 ORTHO05D000809 7.6e-11 70.5 60 51.7
Oeu029558.1 Olea europaea HOM05D000611 ORTHO05D000809 1.3e-10 69.7 69 49.3
Prupe.6G151600 Prunus persica HOM05D000611 ORTHO05D000809 2.2e-10 68.9 60 50.0
Cfa008667 Carpinus fangiana HOM05D000611 ORTHO05D000809 2.9e-10 68.6 60 51.7
Migut.J00764 Erythranthe guttata HOM05D000611 ORTHO05D000809 3.8e-10 68.2 58 51.7
Cfa010236 Carpinus fangiana HOM05D000611 ORTHO05D000809 4.9e-10 67.8 60 45.0
CAN.G245.3 Capsicum annuum HOM05D000611 ORTHO05D000809 8.4e-10 67.0 56 57.1
CiPaw.09G165000 Carya illinoinensis HOM05D000611 ORTHO05D000809 8.4e-10 67.0 59 47.5
SalBow3G0482 Salvia bowleyana HOM05D000611 ORTHO05D000809 8.4e-10 67.0 57 47.4
FvH4_3g27052 Fragaria vesca HOM05D000611 ORTHO05D000809 1.1e-09 66.6 64 43.8
FAN11G3944 Fragaria x ananassa HOM05D000611 ORTHO05D000809 1.1e-09 66.6 64 43.8
MBI11_g45238_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D000809 1.1e-09 66.6 60 48.3
Solyc01g056600.2 Solanum lycopersicum HOM05D000611 ORTHO05D000809 1.1e-09 66.6 63 49.2
MSTRG.19353 Avicennia marina HOM05D000611 ORTHO05D000809 1.4e-09 66.2 57 49.1
Potri.009G152900 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.4e-09 66.2 60 43.3
TAR633G1322 Trochodendron aralioides HOM05D000611 ORTHO05D000809 1.4e-09 66.2 60 46.7
VMungo0464G0567 Vigna mungo HOM05D000611 ORTHO05D000809 1.4e-09 66.2 60 46.7
arahy.Tifrunner.gnm1.ann1.70YL0N Arachis hypogaea HOM05D000611 ORTHO05D000809 1.9e-09 65.9 59 47.5
DCAR_012287 Daucus carota HOM05D000611 ORTHO05D000809 1.9e-09 65.9 60 50.0
Eucgr.K01507 Eucalyptus grandis HOM05D000611 ORTHO05D000809 1.9e-09 65.9 60 46.7
Gohir.D13G102300 Gossypium hirsutum HOM05D000611 ORTHO05D000809 1.9e-09 65.9 60 48.3
Gorai.013G114500 Gossypium raimondii HOM05D000611 ORTHO05D000809 1.9e-09 65.9 60 48.3
PSO339G6700 Papaver somniferum HOM05D000611 ORTHO05D000809 1.9e-09 65.9 60 46.7
EL10Ac5g11756 Beta vulgaris HOM05D000611 ORTHO05D000809 2.4e-09 65.5 56 57.1
Gohir.A13G097600 Gossypium hirsutum HOM05D000611 ORTHO05D000809 2.4e-09 65.5 60 48.3
Migut.N02423 Erythranthe guttata HOM05D000611 ORTHO05D000809 3.2e-09 65.1 60 41.7
Hma1.2p1_0768F.1_g215620 Hydrangea macrophylla HOM05D000611 ORTHO05D000809 3.2e-09 65.1 60 46.7
FAN23G0451 Fragaria x ananassa HOM05D000611 ORTHO05D000809 4.2e-09 64.7 60 51.7
Sopen01g020540 Solanum pennellii HOM05D000611 ORTHO05D000809 5.4e-09 64.3 63 47.6
SGA_v2.0_scaffold112G31647 Striga asiatica HOM05D000611 ORTHO05D000809 5.4e-09 64.3 55 49.1
FAN05G0188 Fragaria x ananassa HOM05D000611 ORTHO05D000809 7.1e-09 63.9 60 50.0
FAN09G1078 Fragaria x ananassa HOM05D000611 ORTHO05D000809 7.1e-09 63.9 60 50.0
FAN14G4558 Fragaria x ananassa HOM05D000611 ORTHO05D000809 7.1e-09 63.9 60 50.0
Lj2C893G4 Lonicera japonica HOM05D000611 ORTHO05D000809 7.1e-09 63.9 57 45.6
Lalb_Chr21g0317261 Lupinus albus HOM05D000611 ORTHO05D000809 7.1e-09 63.9 56 50.0
Ciclev10018273m.g Citrus clementina HOM05D000611 ORTHO05D000809 9.3e-09 63.5 60 41.7
FvH4_1g25060 Fragaria vesca HOM05D000611 ORTHO05D000809 9.3e-09 63.5 60 50.0
COL.COLO4_28606 Corchorus olitorius HOM05D000611 ORTHO05D000809 1.2e-08 63.2 56 51.8
Haze_20458 Corylus avellana HOM05D000611 ORTHO05D000809 1.2e-08 63.2 60 45.0
FAN11G0993 Fragaria x ananassa HOM05D000611 ORTHO05D000809 1.2e-08 63.2 60 50.0
Lj2g0026825 Lotus japonicus HOM05D000611 ORTHO05D000809 1.2e-08 63.2 60 43.3
Peaxi162Scf00061g03010 Petunia axillaris HOM05D000611 ORTHO05D000809 1.2e-08 63.2 60 50.0
SGA_v2.0_scaffold16G07557 Striga asiatica HOM05D000611 ORTHO05D000809 1.2e-08 63.2 59 45.8
Atru.chr3.3017 Acer truncatum HOM05D000611 ORTHO05D000809 1.6e-08 62.8 60 41.7
FAN19G1640 Fragaria x ananassa HOM05D000611 ORTHO05D000809 1.6e-08 62.8 60 50.0
RcHm_v2.0_Chr5g0049631 Rosa chinensis HOM05D000611 ORTHO05D000809 1.6e-08 62.8 60 45.0
Dinv32137 Davidia involucrata HOM05D000611 ORTHO05D000809 2.1e-08 62.4 60 45.0
Gohir.D07G118900 Gossypium hirsutum HOM05D000611 ORTHO05D000809 2.1e-08 62.4 60 40.0
Gorai.001G127900 Gossypium raimondii HOM05D000611 ORTHO05D000809 2.1e-08 62.4 60 40.0
Nitab4.5_0000098g0090 Nicotiana tabacum HOM05D000611 ORTHO05D000809 2.1e-08 62.4 55 56.4
CSS0001405 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D000809 2.7e-08 62.0 56 48.2
Duzib168G2209 Durio zibethinus HOM05D000611 ORTHO05D000809 2.7e-08 62.0 60 40.0
Lalb_Chr02g0157271 Lupinus albus HOM05D000611 ORTHO05D000809 2.7e-08 62.0 60 43.3
PGR142G2002 Punica granatum HOM05D000611 ORTHO05D000809 2.7e-08 62.0 59 39.0
QL07p018587 Quercus lobata HOM05D000611 ORTHO05D000809 2.7e-08 62.0 66 43.9
Thecc.09G265700 Theobroma cacao HOM05D000611 ORTHO05D000809 2.7e-08 62.0 71 38.0
TWI34G2036 Tripterygium wilfordii HOM05D000611 ORTHO05D000809 2.7e-08 62.0 62 45.2
Aqoxy1G00542 Aquilegia oxysepala HOM05D000611 ORTHO05D000809 3.5e-08 61.6 62 40.3
MD11G1178800 Malus domestica HOM05D000611 ORTHO05D000809 3.5e-08 61.6 60 43.3
DCAR_012285 Daucus carota HOM05D000611 ORTHO05D000809 4.6e-08 61.2 60 48.3
Nn6g32381 Nelumbo nucifera HOM05D000611 ORTHO05D000809 4.6e-08 61.2 70 42.9
Nitab4.5_0001606g0050 Nicotiana tabacum HOM05D000611 ORTHO05D000809 4.6e-08 61.2 55 56.4
QL01p018552 Quercus lobata HOM05D000611 ORTHO05D000809 4.6e-08 61.2 60 43.3
SGA_v2.0_scaffold31G12798 Striga asiatica HOM05D000611 ORTHO05D000809 4.6e-08 61.2 69 37.7
FAN21G3967 Fragaria x ananassa HOM05D000611 ORTHO05D000809 6.0e-08 60.8 62 46.8
RcHm_v2.0_Chr2g0127561 Rosa chinensis HOM05D000611 ORTHO05D000809 6.0e-08 60.8 60 48.3
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 7.8e-08 60.5 60 45.0
Lalb_Chr14g0364631 Lupinus albus HOM05D000611 ORTHO05D000809 7.8e-08 60.5 56 41.1
Manes.09G138400 Manihot esculenta HOM05D000611 ORTHO05D000809 7.8e-08 60.5 60 45.0
Phvul.004G051700 Phaseolus vulgaris HOM05D000611 ORTHO05D000809 7.8e-08 60.5 60 41.7
Glyma.05G090000 Glycine max HOM05D000611 ORTHO05D000809 1.0e-07 60.1 60 40.0
Oeu032079.1 Olea europaea HOM05D000700 ORTHO05D000397 1.0e-07 60.1 60 43.3
Potri.019G038226 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.0e-07 60.1 73 35.6
AUR62001594 Chenopodium quinoa HOM05D000611 ORTHO05D000809 1.7e-07 59.3 56 46.4
Potri.013G061500 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.7e-07 59.3 62 40.3
Potri.019G038100 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.7e-07 59.3 60 40.0
Potri.019G038184 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.7e-07 59.3 66 39.4
Prupe.3G134100 Prunus persica HOM05D000611 ORTHO05D000809 1.7e-07 59.3 60 45.0
VMungo0540G2129 Vigna mungo HOM05D000611 ORTHO05D000809 2.3e-07 58.9 60 40.0
DCAR_009081 Daucus carota HOM05D000611 ORTHO05D000809 3.0e-07 58.5 60 41.7
Lj6g0018938 Lotus japonicus HOM05D000611 ORTHO05D000809 3.0e-07 58.5 60 38.3
AUR62020186 Chenopodium quinoa HOM05D000611 ORTHO05D000809 3.9e-07 58.2 56 44.6
MD17G1235600 Malus domestica HOM05D000611 ORTHO05D000809 3.9e-07 58.2 60 45.0
Actinidia37799 Actinidia chinensis HOM05D000611 ORTHO05D000809 5.1e-07 57.8 60 45.0
Aqoxy3G00859 Aquilegia oxysepala HOM05D000611 ORTHO05D000809 5.1e-07 57.8 76 36.8
TPR.G39533 Trifolium pratense HOM05D000611 ORTHO05D000809 5.1e-07 57.8 60 41.7
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 5.1e-07 57.8 55 45.5
Dinv05571 Davidia involucrata HOM05D000611 ORTHO05D000809 6.6e-07 57.4 62 41.9
Lj1C1056G10 Lonicera japonica HOM05D000611 ORTHO05D000809 6.6e-07 57.4 62 45.2
PGR102G2603 Punica granatum HOM05D000611 ORTHO05D000809 8.7e-07 57.0 60 35.0
vmacro12778 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 8.7e-07 57.0 62 50.0
Atru.chr3.3020 Acer truncatum HOM05D000611 ORTHO05D000809 1.1e-06 56.6 60 38.3
Nitab4.5_0007747g0020 Nicotiana tabacum HOM05D000611 ORTHO05D000809 1.1e-06 56.6 60 40.0
Potri.019G037900 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.1e-06 56.6 63 38.1
SHI14934 Sapria himalayana HOM05D000611 ORTHO05D000809 1.1e-06 56.6 57 45.6
Sed0023110 Sechium edule HOM05D000611 ORTHO05D000809 1.1e-06 56.6 62 37.1
Ciclev10020214m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.5e-06 56.2 60 45.0
Sabra13G0054400 Salix brachista HOM05D000611 ORTHO05D000809 1.5e-06 56.2 60 40.0
PSO017G2164 Papaver somniferum HOM05D000611 ORTHO05D000809 1.9e-06 55.8 56 42.9
Prupe.3G133800 Prunus persica HOM05D000611 ORTHO05D000809 1.9e-06 55.8 60 41.7
THA.LOC104823780 Tarenaya hassleriana HOM05D000611 ORTHO05D000809 1.9e-06 55.8 54 40.7
BcaB04g19414 Brassica carinata HOM05D000611 ORTHO05D000809 2.5e-06 55.5 58 39.7
CANSAT25G3146 Cannabis sativa HOM05D000611 ORTHO05D000809 2.5e-06 55.5 61 39.3
Cc00_g06240 Coffea canephora HOM05D000611 ORTHO05D000809 2.5e-06 55.5 65 35.4
Lsat_1_v5_gn_3_114541 Lactuca sativa HOM05D000611 ORTHO05D000809 2.5e-06 55.5 62 41.9
PSO478G1148 Papaver somniferum HOM05D000611 ORTHO05D000809 2.5e-06 55.5 56 42.9
ATR0697G034 Amborella trichopoda HOM05D000611 ORTHO05D000809 3.3e-06 55.1 56 39.3
Lsat_1_v5_gn_3_114521 Lactuca sativa HOM05D000611 ORTHO05D000809 3.3e-06 55.1 60 40.0
Phvul.006G039700 Phaseolus vulgaris HOM05D000611 ORTHO05D000809 3.3e-06 55.1 58 37.9
Rhsim01G0197600 Rhododendron simsii HOM05D000611 ORTHO05D000809 3.3e-06 55.1 60 40.0
Carub.0005s0508 Capsella rubella HOM05D000611 ORTHO05D000809 4.3e-06 54.7 56 41.1
CAN.G794.12 Capsicum annuum HOM05D000611 ORTHO05D000809 4.3e-06 54.7 59 40.7
ECA240G2968 Erigeron canadensis HOM05D000611 ORTHO05D000809 4.3e-06 54.7 62 40.3
Thhalv10004385m.g Eutrema salsugineum HOM05D000611 ORTHO05D000809 4.3e-06 54.7 56 41.1
Lj1A1057G22 Lonicera japonica HOM05D000611 ORTHO05D000809 4.3e-06 54.7 62 43.5
MD09G1006600 Malus domestica HOM05D000611 ORTHO05D000809 4.3e-06 54.7 56 41.1
Sp2g16050 Schrenkiella parvula HOM05D000611 ORTHO05D000809 4.3e-06 54.7 56 41.1
GSVIVG01029969001 Vitis vinifera HOM05D000611 ORTHO05D000809 5.6e-06 54.3 56 44.6
C09p03370 Brassica napus HOM05D000611 ORTHO05D000809 7.3e-06 53.9 58 37.9
Hma1.2p1_1288F.1_g273320 Hydrangea macrophylla HOM05D000611 ORTHO05D000809 7.3e-06 53.9 61 39.3
Medtr6g028020 Medicago truncatula HOM05D000611 ORTHO05D000809 7.3e-06 53.9 62 38.7
BolC9t53258H Brassica oleracea HOM05D000611 ORTHO05D000809 9.6e-06 53.5 58 37.9
ClCG10G013620 Citrullus lanatus HOM05D000611 ORTHO05D000809 9.6e-06 53.5 62 37.1
MELO3C026605.2 Cucumis melo HOM05D000611 ORTHO05D000809 9.6e-06 53.5 62 37.1
FvH4_3g32200 Fragaria vesca HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
FAN11G1434 Fragaria x ananassa HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
FAN16G2754 Fragaria x ananassa HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
FAN21G3051 Fragaria x ananassa HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
FAN25G2314 Fragaria x ananassa HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
Lj3g0016053 Lotus japonicus HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
RcHm_v2.0_Chr5g0058811 Rosa chinensis HOM05D000611 ORTHO05D000809 9.6e-06 53.5 56 41.1
PGSC0003DMG400008709 Solanum tuberosum HOM05D000611 ORTHO05D000809 9.6e-06 53.5 60 41.7


User provided reference genes

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