Gene: Sed0023110
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0023110
- Transcript Identifier Sed0023110.1
- Gene Type Coding gene
- Location LG02 : 46328209-46340248 : positive
Gene Family Information
- ID HOM05D000611
- #Genes/#Species 929/97
- Phylogenetic origin
- ID ORTHO05D000809
- #Genes/#Species 602/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sed0023110.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009616 | ISO | PLAZA Integrative Orthology | RNAi-mediated antiviral immune response | AT3G62800 |
| GO:0070919 | ISO | PLAZA Integrative Orthology | production of siRNA involved in chromatin silencing by small RNA | AT3G62800 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT3G62800 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G62800 |
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT3G62800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G26932 |
| GO:0003725 | ISO | PLAZA Integrative Orthology | double-stranded RNA binding | AT5G41070 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G62800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014720 | Double-stranded RNA-binding domain |
| Mapman id | Description |
|---|---|
| 16.9.1.4.1 | RNA processing.mRNA silencing.transacting siRNA pathway.DRB4-DRB7.1 dsRNA-binding regulator complex.component DRB4 |