Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02839 Beta vulgaris HOM05D000611 ORTHO05D000809 1.5e-58 229.2 109 100.0
EL10Ac2g02837 Beta vulgaris HOM05D000611 ORTHO05D000809 2.7e-34 148.7 74 93.2
EL10Ac2g02840 Beta vulgaris HOM05D000611 ORTHO05D000809 5.2e-30 134.4 89 74.2
EL10Ac2g02838 Beta vulgaris HOM05D000611 ORTHO05D000809 4.9e-20 101.3 49 91.8
EL10Ac8g20014 Beta vulgaris HOM05D000611 ORTHO05D000809 1.0e-14 83.6 61 68.9
AUR62039714 Chenopodium quinoa HOM05D000611 ORTHO05D000809 1.0e-14 83.6 60 63.3
Hund10768 Selenicereus undatus HOM05D000611 ORTHO05D000809 1.0e-14 83.6 60 65.0
EL10Ac8g20013 Beta vulgaris HOM05D000611 ORTHO05D000809 1.8e-14 82.8 74 56.8
AUR62036263 Chenopodium quinoa HOM05D000611 ORTHO05D000809 3.0e-14 82.0 60 61.7
Thecc.05G244900 Theobroma cacao HOM05D000611 ORTHO05D000809 3.4e-13 78.6 61 52.5
Duzib128G1685 Durio zibethinus HOM05D000611 ORTHO05D000809 1.7e-12 76.3 61 54.1
EL10Ac5g11756 Beta vulgaris HOM05D000611 ORTHO05D000809 3.7e-12 75.1 61 59.0
COL.COLO4_28606 Corchorus olitorius HOM05D000611 ORTHO05D000809 1.4e-11 73.2 67 52.2
arahy.Tifrunner.gnm1.ann1.DX8RYA Arachis hypogaea HOM05D000611 ORTHO05D000809 1.9e-11 72.8 62 48.4
Gohir.D13G102300 Gossypium hirsutum HOM05D000611 ORTHO05D000809 4.1e-11 71.6 61 50.8
Gorai.013G114500 Gossypium raimondii HOM05D000611 ORTHO05D000809 4.1e-11 71.6 61 50.8
MSTRG.19353 Avicennia marina HOM05D000611 ORTHO05D000809 5.4e-11 71.2 61 50.8
Cfa010236 Carpinus fangiana HOM05D000611 ORTHO05D000809 5.4e-11 71.2 66 50.0
Gohir.A13G097600 Gossypium hirsutum HOM05D000611 ORTHO05D000809 5.4e-11 71.2 61 50.8
Potri.013G061500 Populus trichocarpa HOM05D000611 ORTHO05D000809 5.4e-11 71.2 63 47.6
Cfa008667 Carpinus fangiana HOM05D000611 ORTHO05D000809 7.0e-11 70.9 61 54.1
Ciclev10018273m.g Citrus clementina HOM05D000611 ORTHO05D000809 7.0e-11 70.9 61 47.5
Solyc01g056600.2 Solanum lycopersicum HOM05D000611 ORTHO05D000809 7.0e-11 70.9 67 55.2
DCAR_012287 Daucus carota HOM05D000611 ORTHO05D000809 9.2e-11 70.5 66 54.5
FAN23G0451 Fragaria x ananassa HOM05D000611 ORTHO05D000809 9.2e-11 70.5 62 54.8
CAN.G245.3 Capsicum annuum HOM05D000611 ORTHO05D000809 1.2e-10 70.1 67 56.7
PSO339G6700 Papaver somniferum HOM05D000611 ORTHO05D000809 1.2e-10 70.1 62 50.0
Prupe.6G151600 Prunus persica HOM05D000611 ORTHO05D000809 1.2e-10 70.1 61 50.8
TAR633G1322 Trochodendron aralioides HOM05D000611 ORTHO05D000809 1.2e-10 70.1 61 50.8
VMungo0464G0567 Vigna mungo HOM05D000611 ORTHO05D000809 1.2e-10 70.1 62 48.4
QL07p018587 Quercus lobata HOM05D000611 ORTHO05D000809 1.6e-10 69.7 67 49.3
Sabra13G0054400 Salix brachista HOM05D000611 ORTHO05D000809 1.6e-10 69.7 62 46.8
Aqoxy3G00859 Aquilegia oxysepala HOM05D000611 ORTHO05D000809 2.0e-10 69.3 66 53.0
FAN05G0188 Fragaria x ananassa HOM05D000611 ORTHO05D000809 2.0e-10 69.3 62 53.2
FAN09G1078 Fragaria x ananassa HOM05D000611 ORTHO05D000809 2.0e-10 69.3 62 53.2
FAN14G4558 Fragaria x ananassa HOM05D000611 ORTHO05D000809 2.0e-10 69.3 62 53.2
Gohir.D07G118900 Gossypium hirsutum HOM05D000611 ORTHO05D000809 2.0e-10 69.3 61 47.5
Gorai.001G127900 Gossypium raimondii HOM05D000611 ORTHO05D000809 2.0e-10 69.3 61 47.5
Duzib168G2209 Durio zibethinus HOM05D000611 ORTHO05D000809 2.7e-10 68.9 61 45.9
FvH4_1g25060 Fragaria vesca HOM05D000611 ORTHO05D000809 2.7e-10 68.9 62 53.2
FAN11G0993 Fragaria x ananassa HOM05D000611 ORTHO05D000809 2.7e-10 68.9 66 51.5
MBI11_g45238_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D000809 2.7e-10 68.9 61 50.8
Aqoxy1G00542 Aquilegia oxysepala HOM05D000611 ORTHO05D000809 3.5e-10 68.6 63 46.0
Potri.019G038184 Populus trichocarpa HOM05D000611 ORTHO05D000809 3.5e-10 68.6 68 47.1
Sopen01g020540 Solanum pennellii HOM05D000611 ORTHO05D000809 3.5e-10 68.6 67 53.7
Thecc.09G265700 Theobroma cacao HOM05D000611 ORTHO05D000809 3.5e-10 68.6 80 40.0
Atru.chr3.3017 Acer truncatum HOM05D000611 ORTHO05D000809 4.6e-10 68.2 66 48.5
arahy.Tifrunner.gnm1.ann1.70YL0N Arachis hypogaea HOM05D000611 ORTHO05D000809 4.6e-10 68.2 62 46.8
Ciclev10020214m.g Citrus clementina HOM05D000611 ORTHO05D000809 4.6e-10 68.2 67 50.7
Migut.J00764 Erythranthe guttata HOM05D000611 ORTHO05D000809 4.6e-10 68.2 61 50.8
Eucgr.K01507 Eucalyptus grandis HOM05D000611 ORTHO05D000809 4.6e-10 68.2 62 46.8
FAN19G1640 Fragaria x ananassa HOM05D000611 ORTHO05D000809 4.6e-10 68.2 62 53.2
Lj2C893G4 Lonicera japonica HOM05D000611 ORTHO05D000809 4.6e-10 68.2 61 45.9
Potri.009G152900 Populus trichocarpa HOM05D000611 ORTHO05D000809 4.6e-10 68.2 66 45.5
Prupe.3G133800 Prunus persica HOM05D000611 ORTHO05D000809 4.6e-10 68.2 62 50.0
Prupe.3G134100 Prunus persica HOM05D000611 ORTHO05D000809 4.6e-10 68.2 61 52.5
SalBow3G0482 Salvia bowleyana HOM05D000611 ORTHO05D000809 6.0e-10 67.8 58 48.3
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 1.0e-09 67.0 62 46.8
CiPaw.09G165000 Carya illinoinensis HOM05D000611 ORTHO05D000809 1.0e-09 67.0 60 46.7
Migut.N02423 Erythranthe guttata HOM05D000611 ORTHO05D000809 1.0e-09 67.0 61 42.6
Nn6g32381 Nelumbo nucifera HOM05D000611 ORTHO05D000809 1.3e-09 66.6 61 52.5
Potri.019G037900 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.3e-09 66.6 68 45.6
FAN21G3967 Fragaria x ananassa HOM05D000611 ORTHO05D000809 1.7e-09 66.2 62 51.6
RcHm_v2.0_Chr2g0127561 Rosa chinensis HOM05D000611 ORTHO05D000809 1.7e-09 66.2 62 50.0
SGA_v2.0_scaffold16G07557 Striga asiatica HOM05D000611 ORTHO05D000809 1.7e-09 66.2 65 47.7
Haze_20458 Corylus avellana HOM05D000611 ORTHO05D000809 2.3e-09 65.9 61 47.5
SGA_v2.0_scaffold112G31647 Striga asiatica HOM05D000611 ORTHO05D000809 2.3e-09 65.9 60 46.7
Dinv32137 Davidia involucrata HOM05D000611 ORTHO05D000809 3.0e-09 65.5 61 49.2
Nitab4.5_0000098g0090 Nicotiana tabacum HOM05D000611 ORTHO05D000809 3.0e-09 65.5 67 53.7
PGR142G2002 Punica granatum HOM05D000611 ORTHO05D000809 3.0e-09 65.5 62 40.3
CSS0001405 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D000809 3.9e-09 65.1 55 52.7
FvH4_3g27052 Fragaria vesca HOM05D000611 ORTHO05D000809 3.9e-09 65.1 61 44.3
FAN11G3944 Fragaria x ananassa HOM05D000611 ORTHO05D000809 3.9e-09 65.1 61 44.3
MD17G1235600 Malus domestica HOM05D000611 ORTHO05D000809 3.9e-09 65.1 62 48.4
TWI34G2036 Tripterygium wilfordii HOM05D000611 ORTHO05D000809 3.9e-09 65.1 61 47.5
Actinidia03940 Actinidia chinensis HOM05D000611 ORTHO05D000809 5.0e-09 64.7 63 46.0
Peaxi162Scf00061g03010 Petunia axillaris HOM05D000611 ORTHO05D000809 5.0e-09 64.7 61 50.8
Glyma.05G090000 Glycine max HOM05D000611 ORTHO05D000809 6.6e-09 64.3 67 43.3
Hma1.2p1_0768F.1_g215620 Hydrangea macrophylla HOM05D000611 ORTHO05D000809 6.6e-09 64.3 59 49.2
MD11G1178800 Malus domestica HOM05D000611 ORTHO05D000809 6.6e-09 64.3 61 45.9
Nitab4.5_0001606g0050 Nicotiana tabacum HOM05D000611 ORTHO05D000809 6.6e-09 64.3 67 53.7
Phvul.004G051700 Phaseolus vulgaris HOM05D000611 ORTHO05D000809 6.6e-09 64.3 62 43.5
Lj2g0026825 Lotus japonicus HOM05D000611 ORTHO05D000809 8.6e-09 63.9 67 43.3
Lalb_Chr21g0317261 Lupinus albus HOM05D000611 ORTHO05D000809 8.6e-09 63.9 62 45.2
Potri.019G038100 Populus trichocarpa HOM05D000611 ORTHO05D000809 8.6e-09 63.9 59 45.8
Potri.019G038226 Populus trichocarpa HOM05D000611 ORTHO05D000809 8.6e-09 63.9 59 45.8
Atru.chr3.3020 Acer truncatum HOM05D000611 ORTHO05D000809 1.1e-08 63.5 66 45.5
QL01p018552 Quercus lobata HOM05D000611 ORTHO05D000809 1.1e-08 63.5 61 45.9
Nitab4.5_0007747g0020 Nicotiana tabacum HOM05D000611 ORTHO05D000809 1.5e-08 63.2 61 44.3
Sabra19G0049100 Salix brachista HOM05D000611 ORTHO05D000809 1.5e-08 63.2 61 47.5
SGA_v2.0_scaffold31G12798 Striga asiatica HOM05D000611 ORTHO05D000809 1.5e-08 63.2 61 42.6
EL10Ac7g16245 Beta vulgaris HOM05D000611 ORTHO05D000809 1.9e-08 62.8 66 43.9
DCAR_012285 Daucus carota HOM05D000611 ORTHO05D000809 1.9e-08 62.8 66 50.0
Lj1A1057G22 Lonicera japonica HOM05D000611 ORTHO05D000809 1.9e-08 62.8 64 48.4
Lj1C1056G10 Lonicera japonica HOM05D000611 ORTHO05D000809 1.9e-08 62.8 63 49.2
Oeu032079.1 Olea europaea HOM05D000700 ORTHO05D000397 1.9e-08 62.8 61 45.9
TPR.G39533 Trifolium pratense HOM05D000611 ORTHO05D000809 2.5e-08 62.4 62 45.2
Sed0023110 Sechium edule HOM05D000611 ORTHO05D000809 3.3e-08 62.0 68 42.6
Cc00_g06240 Coffea canephora HOM05D000611 ORTHO05D000809 4.3e-08 61.6 66 39.4
Dinv05571 Davidia involucrata HOM05D000611 ORTHO05D000809 4.3e-08 61.6 61 47.5
Lsat_1_v5_gn_3_114541 Lactuca sativa HOM05D000611 ORTHO05D000809 4.3e-08 61.6 61 45.9
Lalb_Chr02g0157271 Lupinus albus HOM05D000611 ORTHO05D000809 4.3e-08 61.6 61 42.6
Atru.chr2.1464 Acer truncatum HOM05D000611 ORTHO05D000809 5.6e-08 61.2 62 45.2
CAN.G794.12 Capsicum annuum HOM05D000611 ORTHO05D000809 5.6e-08 61.2 60 45.0
vmacro12778 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 5.6e-08 61.2 60 50.0
Lsat_1_v5_gn_3_114521 Lactuca sativa HOM05D000611 ORTHO05D000809 7.3e-08 60.8 61 44.3
Lalb_Chr14g0364631 Lupinus albus HOM05D000611 ORTHO05D000809 9.5e-08 60.5 61 39.3
Rhsim01G0197600 Rhododendron simsii HOM05D000611 ORTHO05D000809 9.5e-08 60.5 67 44.8
Lj6g0018938 Lotus japonicus HOM05D000611 ORTHO05D000809 1.2e-07 60.1 66 42.4
vmacro07556 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 1.6e-07 59.7 70 41.4
Cc06_g07300 Coffea canephora HOM05D000611 ORTHO05D000809 2.1e-07 59.3 63 42.9
PGSC0003DMG400008709 Solanum tuberosum HOM05D000611 ORTHO05D000809 2.8e-07 58.9 61 45.9
COL.COLO4_25321 Corchorus olitorius HOM05D000611 ORTHO05D000809 3.6e-07 58.5 62 40.3
AUR62001594 Chenopodium quinoa HOM05D000611 ORTHO05D000809 6.2e-07 57.8 61 44.3
CsaV3_3G043040 Cucumis sativus L. HOM05D000611 ORTHO05D000809 6.2e-07 57.8 68 41.2
Psat5g113280 Pisum sativum HOM05D000611 ORTHO05D000809 6.2e-07 57.8 67 38.8
Psat1g094760 Pisum sativum HOM05D000611 ORTHO05D000809 8.0e-07 57.4 62 41.9
Psat5g113120 Pisum sativum HOM05D000611 ORTHO05D000809 8.0e-07 57.4 66 40.9
Solyc01g009190.3 Solanum lycopersicum HOM05D000611 ORTHO05D000809 8.0e-07 57.4 61 42.6
ATR0697G034 Amborella trichopoda HOM05D000611 ORTHO05D000809 1.1e-06 57.0 57 42.1
TPR.G36395 Trifolium pratense HOM05D000611 ORTHO05D000809 1.1e-06 57.0 67 43.3
CANSAT25G3146 Cannabis sativa HOM05D000611 ORTHO05D000809 1.4e-06 56.6 61 41.0
vmacro07555 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 1.4e-06 56.6 60 45.0
VMungo0540G2129 Vigna mungo HOM05D000611 ORTHO05D000809 1.4e-06 56.6 66 40.9
Medtr6g092600 Medicago truncatula HOM05D000611 ORTHO05D000809 1.8e-06 56.2 66 40.9
THA.LOC104823780 Tarenaya hassleriana HOM05D000611 ORTHO05D000809 1.8e-06 56.2 55 41.8
Rhsim03G0053100 Rhododendron simsii HOM05D000611 ORTHO05D000809 2.3e-06 55.8 61 47.5
SHI14934 Sapria himalayana HOM05D000611 ORTHO05D000809 2.3e-06 55.8 62 41.9
DCAR_009081 Daucus carota HOM05D000611 ORTHO05D000809 4.0e-06 55.1 60 40.0
Medtr6g028020 Medicago truncatula HOM05D000611 ORTHO05D000809 4.0e-06 55.1 65 43.1
ECA240G2968 Erigeron canadensis HOM05D000611 ORTHO05D000809 5.2e-06 54.7 64 39.1
TWI79G1772 Tripterygium wilfordii HOM05D000611 ORTHO05D000809 6.8e-06 54.3 62 40.3


User provided reference genes

Program Settings