Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.8e-156 555.8 279 100.0
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.4e-132 476.5 279 86.0
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 7.1e-116 421.0 262 81.7
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.9e-109 398.3 251 77.7
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.5e-107 392.1 357 61.6
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.5e-105 386.0 256 74.6
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 2.5e-105 386.0 257 74.3
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 3.3e-105 385.6 267 72.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 5.6e-105 384.8 256 73.0
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 7.4e-105 384.4 251 76.1
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 7.4e-105 384.4 257 75.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.8e-104 382.5 250 75.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.1e-103 380.6 254 75.2
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.5e-102 376.7 250 72.8
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 3.4e-102 375.6 250 72.4
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 3.4e-102 375.6 255 72.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 9.9e-102 374.0 255 75.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.2e-101 372.9 256 73.4
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.8e-101 372.1 254 71.7
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.8e-101 372.1 244 75.4
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 4.9e-101 371.7 257 72.4
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 6.4e-101 371.3 269 68.8
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 6.4e-101 371.3 253 72.7
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.1e-100 370.5 253 73.9
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 3.2e-100 369.0 251 72.5
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 4.2e-100 368.6 255 73.7
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 5.5e-100 368.2 240 74.2
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 9.3e-100 367.5 250 72.4
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 2.1e-99 366.3 278 66.5
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 2.1e-99 366.3 259 73.0
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 6.0e-99 364.8 232 75.9
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 7.9e-99 364.4 261 70.9
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 7.9e-99 364.4 259 69.5
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 7.9e-99 364.4 244 73.8
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 7.9e-99 364.4 244 73.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 7.9e-99 364.4 248 72.2
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.0e-98 364.0 256 72.7
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.0e-98 364.0 255 71.8
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.3e-98 363.6 251 71.7
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.8e-98 363.2 257 70.0
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.8e-98 363.2 262 67.9
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.0e-98 362.5 224 79.0
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 3.0e-98 362.5 246 73.6
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 5.1e-98 361.7 250 71.2
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.7e-98 361.3 273 66.7
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 6.7e-98 361.3 255 72.5
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-97 360.5 248 71.0
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.1e-97 360.5 253 72.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.9e-97 359.8 265 69.1
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.9e-97 359.8 231 76.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 2.5e-97 359.4 271 68.3
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.5e-97 359.4 251 69.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 3.3e-97 359.0 248 71.4
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 5.6e-97 358.2 261 69.3
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 7.4e-97 357.8 247 72.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 9.6e-97 357.5 265 69.4
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 9.6e-97 357.5 239 72.8
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.3e-96 357.1 273 65.9
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.6e-96 356.7 248 70.6
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 2.1e-96 356.3 253 68.4
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.1e-96 356.3 236 74.2
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-96 356.3 247 71.3
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.1e-96 356.3 251 70.9
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.8e-96 355.9 248 71.4
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.7e-96 355.5 247 71.3
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 4.8e-96 355.1 249 70.7
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.4e-95 353.6 271 65.7
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.4e-95 352.8 264 66.3
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 2.4e-95 352.8 244 70.9
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.4e-95 352.8 255 69.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 4.0e-95 352.1 272 66.9
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.0e-95 352.1 272 66.5
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 6.9e-95 351.3 232 74.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 9.0e-95 350.9 256 68.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 9.0e-95 350.9 256 68.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.2e-94 350.5 254 68.5
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.2e-94 350.5 255 69.4
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.5e-94 350.1 268 66.4
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 4.5e-94 348.6 255 69.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.0e-93 347.4 260 66.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.3e-93 347.1 214 79.9
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 3.8e-93 345.5 273 64.8
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.9e-92 343.2 248 69.4
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.5e-92 341.7 259 66.0
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 5.5e-92 341.7 241 67.6
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 7.1e-92 341.3 213 78.9
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.2e-91 340.5 235 71.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.8e-90 336.7 212 76.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.0e-90 335.9 231 70.1
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.5e-89 333.6 233 70.0
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.9e-89 333.2 219 74.0
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 5.7e-89 331.6 210 77.1
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.1e-88 329.7 239 70.7
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.8e-88 328.6 319 56.1
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.8e-87 326.6 213 74.2
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 2.5e-84 316.2 216 74.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 3.2e-84 315.8 258 61.2
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 3.9e-82 308.9 210 71.9
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.8e-80 302.8 203 71.9
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.6e-78 296.2 201 74.1
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 5.1e-74 282.0 199 68.8
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.4e-71 273.9 308 51.9
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 3.4e-70 269.2 226 60.6
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 8.8e-66 254.6 169 76.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 6.3e-64 248.4 141 85.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.1e-63 247.7 176 72.2
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.5e-62 242.3 239 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 1.7e-61 240.4 241 50.6
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.2e-60 235.7 138 86.2
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.0e-57 226.9 231 51.1
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.4e-55 219.9 160 66.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.7e-53 213.8 231 48.9
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.4e-47 193.4 147 68.0
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 2.3e-45 186.8 147 66.0
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 2.9e-45 186.4 146 64.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.5e-44 184.1 146 63.7
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.1e-39 166.4 177 52.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 3.8e-37 159.5 116 70.7
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 3.6e-35 152.9 123 61.8
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.3e-32 144.4 96 71.9
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 4.1e-31 139.4 95 71.6
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.3e-29 134.4 80 77.5
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.3e-24 117.9 66 77.3
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.6e-22 110.9 120 52.5
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.9e-16 89.4 47 78.7
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 4.6e-14 82.8 185 29.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 7.3e-12 75.5 116 43.1
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 9.5e-12 75.1 116 43.1


User provided reference genes

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