Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.0e-167 592.4 321 100.0
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.7e-89 333.6 307 64.5
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 5.9e-74 282.0 305 59.0
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.1e-64 251.1 182 75.8
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.4e-59 234.2 289 53.6
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 2.0e-58 230.3 207 62.3
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 3.5e-58 229.6 293 49.1
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.3e-57 227.6 314 49.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.3e-57 227.6 308 49.0
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.3e-57 226.9 293 48.8
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 2.5e-56 223.4 283 50.2
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 7.3e-56 221.9 287 50.9
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 2.8e-55 219.9 209 56.5
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 6.1e-55 218.8 291 50.2
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 8.0e-55 218.4 215 59.1
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.0e-54 218.0 221 54.3
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.4e-54 217.6 304 46.4
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.3e-54 216.9 223 55.6
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 3.1e-54 216.5 215 58.1
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.5e-53 214.2 289 46.0
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 2.0e-53 213.8 285 48.8
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.4e-53 213.0 288 48.3
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 4.4e-53 212.6 224 52.7
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 9.8e-53 211.5 280 48.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 9.8e-53 211.5 301 47.2
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.3e-52 211.1 277 49.8
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.7e-52 210.7 277 46.2
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 1.7e-52 210.7 285 47.4
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.7e-52 210.7 307 46.3
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 2.9e-52 209.9 232 49.6
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 2.9e-52 209.9 277 46.2
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.9e-52 209.9 232 50.0
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 2.9e-52 209.9 307 45.9
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 4.9e-52 209.1 305 46.9
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 8.3e-52 208.4 208 55.3
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 8.3e-52 208.4 297 47.8
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 8.3e-52 208.4 271 48.3
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.1e-51 208.0 295 46.8
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.4e-51 207.6 291 44.0
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.9e-51 207.2 272 48.2
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 2.4e-51 206.8 312 46.2
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 4.1e-51 206.1 214 52.3
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 5.4e-51 205.7 274 50.0
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 9.2e-51 204.9 210 53.8
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 2.7e-50 203.4 298 46.0
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 4.6e-50 202.6 262 48.9
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 7.8e-50 201.8 307 44.3
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 1.0e-49 201.4 209 52.2
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.0e-49 201.4 215 54.0
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.0e-49 201.4 265 50.6
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.7e-49 200.7 313 44.1
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 2.3e-49 200.3 228 50.4
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 3.0e-49 199.9 213 57.7
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 3.0e-49 199.9 225 52.0
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 5.0e-49 199.1 291 48.1
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 6.6e-49 198.7 264 45.1
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 8.6e-49 198.4 198 55.6
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.9e-48 197.2 211 55.5
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 3.3e-48 196.4 239 51.9
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 5.6e-48 195.7 245 49.4
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 5.6e-48 195.7 216 52.8
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 7.3e-48 195.3 259 44.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 2.1e-47 193.7 264 45.1
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 2.8e-47 193.4 282 44.3
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.6e-47 193.0 246 48.4
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 3.6e-47 193.0 214 51.9
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 8.0e-47 191.8 215 52.6
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.1e-46 191.4 284 45.4
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.1e-46 191.4 297 45.5
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.1e-46 191.4 331 41.1
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.4e-46 191.0 235 46.0
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.4e-46 191.0 230 50.9
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.4e-46 191.0 173 60.1
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 2.3e-46 190.3 219 50.7
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 3.1e-46 189.9 287 45.6
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 4.0e-46 189.5 289 46.4
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 5.2e-46 189.1 309 42.7
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 8.9e-46 188.3 257 48.6
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 2.0e-45 187.2 196 53.1
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 3.4e-45 186.4 260 46.2
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 7.5e-45 185.3 208 50.5
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 7.5e-45 185.3 223 49.8
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 9.8e-45 184.9 332 39.8
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 3.2e-43 179.9 216 50.5
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 4.1e-43 179.5 394 37.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 7.1e-43 178.7 202 55.0
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.7e-42 176.8 206 50.0
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.3e-41 173.7 230 47.8
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 3.0e-41 173.3 234 48.3
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 3.0e-41 173.3 205 49.3
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 6.6e-41 172.2 297 42.1
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-40 171.4 191 50.8
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.9e-40 170.6 191 51.8
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 7.3e-40 168.7 213 47.4
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 9.5e-40 168.3 260 43.5
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.7e-36 157.5 209 47.8
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 2.7e-34 150.2 201 45.8
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.5e-32 144.4 287 38.0
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 6.0e-26 122.5 207 38.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 4.8e-23 112.8 281 36.3
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.8e-22 110.9 224 40.6
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.1e-19 101.7 196 35.7
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 2.7e-18 97.1 210 35.2
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.1e-16 91.7 145 43.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-14 85.1 124 42.7
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 2.4e-14 84.0 95 48.4
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 5.3e-14 82.8 62 64.5
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 2.6e-13 80.5 122 41.8
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.9e-12 76.3 89 48.3
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.4e-11 73.9 74 55.4
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.2e-11 73.2 77 41.6
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 7.1e-11 72.4 62 62.9
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.6e-10 69.7 95 38.9
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 3.0e-09 67.0 96 42.7
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-08 65.1 155 34.8
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.6e-07 61.2 55 49.1
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.1e-07 60.8 42 64.3


User provided reference genes

Program Settings