Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 6.3e-123 444.1 225 100.0
EL10Ac4g08898 Beta vulgaris HOM05D056011 ORTHO05D089546 1.6e-70 270.0 150 92.7
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 4.3e-31 139.0 89 77.5
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 6.7e-16 88.6 70 62.9
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 1.7e-14 84.0 44 86.4
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 2.2e-14 83.6 39 89.7
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.2e-14 83.6 39 94.9
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 2.8e-14 83.2 39 92.3
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 3.7e-14 82.8 39 94.9
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 3.7e-14 82.8 65 61.5
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 4.8e-14 82.4 39 92.3
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 6.3e-14 82.0 39 89.7
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 6.3e-14 82.0 39 89.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 8.2e-14 81.6 44 81.8
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 8.2e-14 81.6 44 81.8
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 8.2e-14 81.6 44 81.8
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 8.2e-14 81.6 39 89.7
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.1e-13 81.3 39 89.7
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.1e-13 81.3 65 60.0
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.1e-13 81.3 39 87.2
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.4e-13 80.9 39 89.7
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.4e-13 80.9 39 89.7
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.4e-13 80.9 45 77.8
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.4e-13 80.9 61 63.9
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.8e-13 80.5 61 62.3
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 2.4e-13 80.1 39 84.6
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 2.4e-13 80.1 61 63.9
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.4e-13 80.1 39 89.7
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.4e-13 80.1 64 57.8
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 3.1e-13 79.7 61 62.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 3.1e-13 79.7 39 87.2
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.1e-13 79.7 45 75.6
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 3.1e-13 79.7 45 75.6
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 3.1e-13 79.7 39 87.2
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.1e-13 79.7 61 63.9
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 3.1e-13 79.7 61 62.3
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 3.1e-13 79.7 45 75.6
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.1e-13 79.7 39 84.6
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 4.1e-13 79.3 39 84.6
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 4.1e-13 79.3 39 84.6
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 5.3e-13 79.0 44 79.5
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 5.3e-13 79.0 39 87.2
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 5.3e-13 79.0 39 82.1
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 5.3e-13 79.0 39 87.2
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 7.0e-13 78.6 39 84.6
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 7.0e-13 78.6 61 62.3
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 7.0e-13 78.6 39 84.6
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 9.1e-13 78.2 44 75.0
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 9.1e-13 78.2 39 84.6
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 9.1e-13 78.2 39 84.6
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.2e-12 77.8 61 62.3
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.2e-12 77.8 39 87.2
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.2e-12 77.8 39 87.2
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.2e-12 77.8 45 73.3
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 89.7
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 89.7
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 89.7
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 84.6
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 82.1
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 1.6e-12 77.4 39 82.1
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 84.6
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 89.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 89.7
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 87.2
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 79.5
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 2.0e-12 77.0 39 89.7
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.6e-12 76.6 39 82.1
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 3.5e-12 76.3 39 87.2
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 4.5e-12 75.9 39 87.2
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 4.5e-12 75.9 39 87.2
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 4.5e-12 75.9 39 79.5
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 5.9e-12 75.5 39 87.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 7.7e-12 75.1 39 87.2
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 7.7e-12 75.1 39 87.2
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 7.7e-12 75.1 39 84.6
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 7.7e-12 75.1 39 84.6
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 7.7e-12 75.1 66 53.0
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 7.7e-12 75.1 39 84.6
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.0e-11 74.7 39 79.5
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.0e-11 74.7 39 87.2
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.0e-11 74.7 39 84.6
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 84.6
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 84.6
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 82.1
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 82.1
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 82.1
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.3e-11 74.3 39 82.1
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.3e-11 74.3 66 53.0
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.3e-11 74.3 66 53.0
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.7e-11 73.9 64 59.4
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.7e-11 73.9 39 82.1
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.2e-11 73.6 39 79.5
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 6.5e-11 72.0 64 59.4
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.5e-10 70.9 66 53.0
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 2.5e-10 70.1 50 64.0
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.2e-09 67.8 50 60.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 3.0e-08 63.2 51 56.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 8.8e-08 61.6 69 46.4
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 4.8e-06 55.8 81 34.6


User provided reference genes

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