Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.5e-245 851.7 425 100.0
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.2e-217 758.8 425 87.8
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.8e-216 755.7 425 87.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 5.8e-194 681.0 428 77.6
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.3e-193 679.9 433 79.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 5.4e-192 674.5 428 75.7
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 3.9e-190 668.3 470 71.1
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.5e-189 665.6 429 74.4
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 9.6e-189 663.7 429 74.6
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.2e-188 663.3 429 75.8
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 3.6e-188 661.8 420 75.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 8.1e-188 660.6 459 71.2
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 8.1e-188 660.6 419 75.7
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 8.1e-188 660.6 425 75.1
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.5e-186 656.4 425 73.9
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 5.8e-186 654.4 422 74.2
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.2e-185 652.5 422 74.2
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 3.8e-185 651.7 426 74.4
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 4.9e-185 651.4 426 75.1
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 6.4e-185 651.0 423 73.3
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.1e-184 650.2 422 73.2
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.9e-184 649.4 419 74.2
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.4e-184 649.0 419 74.0
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 4.2e-184 648.3 421 74.1
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.2e-184 648.3 430 72.1
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 9.3e-184 647.1 430 72.3
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 9.3e-184 647.1 430 73.0
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.2e-183 646.7 429 72.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.5e-183 645.2 430 72.1
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 4.6e-183 644.8 422 73.0
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.6e-183 644.8 429 71.8
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 6.6e-182 641.0 440 71.8
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 8.7e-182 640.6 429 71.8
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.5e-181 639.8 429 72.0
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.8e-180 635.6 420 73.3
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 3.6e-180 635.2 421 72.7
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 4.0e-179 631.7 427 72.4
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.0e-178 629.4 427 72.4
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.6e-178 627.5 413 72.9
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.3e-177 626.7 430 68.8
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.7e-177 626.3 427 71.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.9e-177 625.5 422 71.6
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 2.9e-177 625.5 419 72.3
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.9e-177 625.5 423 70.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 3.8e-177 625.2 426 71.8
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 4.9e-177 624.8 422 71.6
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.9e-177 624.8 427 72.4
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.1e-176 623.6 428 69.6
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.4e-176 622.5 422 71.8
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.4e-176 621.3 423 70.9
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 3.5e-175 618.6 422 70.9
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 3.5e-175 618.6 422 70.9
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 6.0e-175 617.8 422 70.6
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.3e-174 616.7 425 68.9
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.3e-174 616.7 428 69.2
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.8e-174 616.3 423 71.6
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 3.9e-174 615.1 427 71.0
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 5.1e-174 614.8 423 71.6
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 5.1e-174 614.8 433 68.1
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.7e-174 614.4 423 70.9
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 6.7e-174 614.4 433 68.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 8.7e-174 614.0 423 71.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-173 613.2 423 71.4
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.5e-173 613.2 423 70.2
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 4.3e-173 611.7 425 70.6
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 4.3e-173 611.7 423 70.0
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.6e-173 611.3 422 69.2
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 7.4e-173 610.9 425 70.1
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 9.6e-173 610.5 423 70.4
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 9.6e-173 610.5 423 70.0
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.7e-172 608.6 420 70.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 4.8e-172 608.2 423 69.5
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.4e-171 605.9 428 70.3
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 2.4e-171 605.9 422 69.2
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.1e-171 605.5 446 67.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.2e-170 603.6 425 68.5
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.5e-170 603.2 422 68.5
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.4e-170 602.1 421 67.7
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.4e-170 602.1 421 67.7
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 7.6e-170 600.9 421 69.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 9.9e-170 600.5 425 68.2
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 6.4e-169 597.8 450 65.1
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.9e-168 596.3 421 67.0
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.9e-168 596.3 532 59.2
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 4.2e-168 595.1 435 66.9
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.1e-167 592.8 424 67.7
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.7e-167 592.4 422 69.0
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.7e-167 592.4 420 66.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 6.0e-167 591.3 423 67.8
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.1e-165 587.0 424 67.7
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.5e-165 585.9 424 67.5
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.7e-164 582.0 424 67.5
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 8.2e-164 580.9 425 66.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.8e-163 579.7 424 67.2
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 5.8e-162 574.7 418 67.9
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 4.6e-159 565.1 421 63.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.1e-157 560.5 421 66.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 5.0e-153 545.0 422 64.0
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 6.1e-151 538.1 420 59.0
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 8.8e-150 534.3 424 61.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.7e-148 530.0 416 61.8
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 5.5e-144 515.0 335 75.2
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.4e-139 500.4 356 66.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 5.3e-139 498.4 298 81.5
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.2e-135 487.3 430 55.6
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.0e-134 482.6 422 55.2
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 6.3e-132 474.9 427 57.4
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.4e-131 473.0 432 58.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 2.1e-127 459.9 354 66.7
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 4.7e-127 458.8 424 52.6
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.7e-126 454.9 423 52.0
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.0e-125 453.4 436 56.7
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.1e-120 437.6 425 48.9
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.6e-119 433.7 281 73.7
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.7e-114 416.4 422 53.8
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.3e-110 403.3 277 70.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 4.1e-91 339.3 194 83.5
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.1e-83 314.7 422 42.2
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 6.0e-74 282.3 235 56.2
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 2.4e-70 270.4 292 51.7
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.1e-63 247.3 184 66.3
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-48 198.4 138 72.5
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 9.1e-30 135.6 98 67.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.0e-29 134.4 92 66.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 5.0e-28 129.8 91 67.0
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 4.1e-22 110.2 88 61.4
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 9.1e-14 82.4 366 24.0
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.2e-11 73.6 91 48.4
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 4.1e-06 57.0 41 61.0


User provided reference genes

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