Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.3e-146 523.1 277 100.0
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 6.6e-106 387.9 245 86.9
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.3e-105 385.6 245 86.5
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 2.3e-103 379.4 244 84.0
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 2.4e-100 369.4 244 80.7
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.4e-92 343.6 242 75.2
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 2.1e-80 303.1 243 68.3
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 5.3e-79 298.5 243 68.7
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 9.0e-79 297.7 242 66.5
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.2e-78 297.4 244 68.4
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.7e-77 293.5 237 68.4
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.7e-77 293.5 238 68.1
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.2e-77 293.1 248 66.9
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 2.9e-77 292.7 224 71.9
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 2.9e-77 292.7 241 65.1
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 6.4e-77 291.6 244 67.6
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 8.4e-77 291.2 242 66.5
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 8.4e-77 291.2 242 65.3
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 4.2e-76 288.9 244 66.8
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-76 288.9 242 64.5
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-76 288.9 242 64.5
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 7.1e-76 288.1 242 65.3
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 2.7e-75 286.2 237 65.8
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 4.6e-75 285.4 248 66.1
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.0e-74 284.3 245 63.7
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.8e-74 283.5 249 64.3
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.8e-74 283.5 227 68.3
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 3.9e-74 282.3 239 64.9
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 3.9e-74 282.3 246 66.7
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.1e-73 280.8 248 63.7
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 1.5e-73 280.4 244 63.9
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.5e-73 280.4 246 65.4
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 1.5e-73 280.4 235 65.5
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 1.9e-73 280.0 244 63.9
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 4.3e-73 278.9 248 64.5
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 5.6e-73 278.5 234 66.7
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 7.4e-73 278.1 240 65.0
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 9.6e-73 277.7 234 66.2
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 2.8e-72 276.2 247 63.6
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 4.8e-72 275.4 247 63.2
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 4.8e-72 275.4 249 63.5
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 4.8e-72 275.4 249 63.1
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 8.1e-72 274.6 223 69.5
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 1.4e-71 273.9 246 62.6
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 1.8e-71 273.5 244 63.5
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 1.8e-71 273.5 221 66.5
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 1.8e-71 273.5 218 71.6
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 3.1e-71 272.7 244 63.5
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 3.1e-71 272.7 245 63.7
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 3.1e-71 272.7 246 60.6
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 5.3e-71 271.9 224 66.1
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 6.9e-71 271.6 225 65.8
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 9.0e-71 271.2 245 62.9
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.5e-70 270.4 242 64.0
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.5e-70 270.4 244 63.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.0e-70 270.0 243 63.0
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.0e-70 270.0 224 66.1
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 2.6e-70 269.6 244 61.5
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 3.4e-70 269.2 236 64.8
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.0e-69 267.7 247 62.3
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.2e-69 266.5 223 65.0
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 3.8e-69 265.8 247 62.8
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 3.8e-69 265.8 242 63.2
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.1e-68 264.2 247 59.1
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 1.1e-68 264.2 252 61.5
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 1.1e-68 264.2 231 63.6
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 1.9e-68 263.5 250 60.8
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 2.5e-68 263.1 248 60.9
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 4.2e-68 262.3 243 61.3
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 4.2e-68 262.3 229 64.6
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 9.3e-68 261.2 216 64.8
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 2.7e-67 259.6 224 66.5
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 5.1e-66 255.4 250 58.0
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 6.7e-66 255.0 239 61.1
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 2.5e-65 253.1 245 62.0
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 4.3e-65 252.3 237 59.5
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 5.7e-65 251.9 256 57.8
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 2.8e-64 249.6 253 58.5
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 4.8e-64 248.8 228 61.4
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.1e-63 247.7 250 56.8
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 4.1e-63 245.7 249 56.6
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 6.9e-63 245.0 239 60.7
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.5e-62 243.8 237 59.5
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.5e-62 243.8 237 59.5
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 2.6e-62 243.0 252 56.0
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 3.4e-62 242.7 232 60.3
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.5e-62 242.3 256 55.1
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 7.6e-62 241.5 256 55.5
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.9e-61 239.6 246 56.9
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 3.8e-61 239.2 244 58.6
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 6.5e-61 238.4 256 54.3
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 1.1e-60 237.7 253 55.3
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.1e-60 237.7 174 69.0
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 7.2e-60 235.0 250 54.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 7.2e-60 235.0 250 54.8
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 9.3e-60 234.6 235 59.1
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 4.6e-59 232.3 231 56.3
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 6.1e-59 231.9 226 58.4
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 1.0e-58 231.1 218 60.1
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 1.3e-58 230.7 253 54.2
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 7.4e-57 224.9 233 54.1
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.3e-53 214.2 254 51.2
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 1.3e-53 214.2 249 53.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 5.0e-53 212.2 230 52.2
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 2.5e-52 209.9 251 49.4
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 9.4e-52 208.0 251 49.0
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 9.4e-52 208.0 251 49.0
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.0e-50 204.5 252 48.4
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.8e-50 203.8 164 68.3
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 5.1e-50 202.2 252 49.2
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 5.1e-50 202.2 196 61.7
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 7.4e-49 198.4 185 61.1
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 4.8e-48 195.7 245 46.9
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 4.1e-47 192.6 124 79.8
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.4e-31 141.0 118 61.0
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.9e-29 133.3 246 39.0
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 2.9e-29 133.3 118 59.3
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 3.4e-25 119.8 246 37.0
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 2.2e-24 117.1 151 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 3.1e-23 113.2 162 45.1
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 3.5e-22 109.8 136 51.5
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.0e-21 105.9 73 76.7
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 6.1e-19 99.0 74 73.0
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 1.8e-18 97.4 137 46.0
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 1.3e-16 91.3 80 57.5
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 8.6e-13 78.6 102 50.0
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 8.6e-13 78.6 60 66.7
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 3.3e-12 76.6 115 43.5
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 2.0e-09 67.4 89 48.3
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 1.1e-07 61.6 72 54.2
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 7.8e-06 55.5 64 54.7


User provided reference genes

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