Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00210 Beta vulgaris HOM05D000183 ORTHO05D000100 3.5e-77 291.6 149 100.0
AUR62004541 Chenopodium quinoa HOM05D000183 ORTHO05D000100 6.0e-45 184.5 175 61.7
AUR62022715 Chenopodium quinoa HOM05D000183 ORTHO05D000100 7.8e-45 184.1 225 52.0
Ah.05g179150 Amaranthus hybridus HOM05D000183 ORTHO05D000100 1.4e-33 146.7 218 48.6
Nitab4.5_0004955g0020 Nicotiana tabacum HOM05D000183 ORTHO05D000100 6.9e-25 117.9 166 49.4
Hund27163 Selenicereus undatus HOM05D000183 ORTHO05D000100 5.4e-22 108.2 228 39.9
TWI23G0962 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 1.7e-20 103.2 212 37.7
TWI59G1191 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 2.3e-20 102.8 213 37.1
MD07G1156200 Malus domestica HOM05D000183 ORTHO05D000100 1.5e-19 100.1 210 35.7
QL08p046520 Quercus lobata HOM05D000183 ORTHO05D000100 1.3e-18 97.1 210 35.2
CiPaw.01G079900 Carya illinoinensis HOM05D000183 ORTHO05D000100 2.1e-18 96.3 211 34.6
TWI14G0860 Tripterygium wilfordii HOM05D000183 ORTHO05D000100 2.8e-18 95.9 213 34.7
Ciclev10021877m.g Citrus clementina HOM05D000183 ORTHO05D000100 8.1e-18 94.4 221 35.3
Manes.01G242300 Manihot esculenta HOM05D000183 ORTHO05D000100 8.1e-18 94.4 209 34.0
Potri.014G103000 Populus trichocarpa HOM05D000183 ORTHO05D000100 1.1e-17 94.0 210 34.3
Peaxi162Scf00087g00149 Petunia axillaris HOM05D000183 ORTHO05D000100 1.8e-17 93.2 213 34.7
Haze_15708 Corylus avellana HOM05D000183 ORTHO05D000100 3.1e-17 92.4 210 36.2
Potri.002G176300 Populus trichocarpa HOM05D000183 ORTHO05D000100 6.9e-17 91.3 211 35.1
Ca_02260_v3 Cicer arietinum L. HOM05D000183 ORTHO05D000100 9.0e-17 90.9 164 42.1
Manes.05G018700 Manihot esculenta HOM05D000183 ORTHO05D000100 9.0e-17 90.9 211 34.1
Prupe.2G194400 Prunus persica HOM05D000183 ORTHO05D000100 9.0e-17 90.9 206 37.4
Sc01g0002350 Simmondsia chinensis HOM05D000183 ORTHO05D000100 1.2e-16 90.5 224 33.5
Cfa003757 Carpinus fangiana HOM05D000183 ORTHO05D000100 2.0e-16 89.7 210 36.2
Gohir.A11G099600 Gossypium hirsutum HOM05D000183 ORTHO05D000100 5.8e-16 88.2 212 34.9
Gohir.D11G104100 Gossypium hirsutum HOM05D000183 ORTHO05D000100 5.8e-16 88.2 212 34.9
Gorai.007G111400 Gossypium raimondii HOM05D000183 ORTHO05D000100 5.8e-16 88.2 212 34.9
RcHm_v2.0_Chr1g0360751 Rosa chinensis HOM05D000183 ORTHO05D000100 1.7e-15 86.7 208 36.1
TAR629G1267 Trochodendron aralioides HOM05D000183 ORTHO05D000100 1.7e-15 86.7 208 35.1
Duzib138G1536 Durio zibethinus HOM05D000183 ORTHO05D000100 2.9e-15 85.9 209 34.0
FAN03G1073 Fragaria x ananassa HOM05D000183 ORTHO05D000100 2.9e-15 85.9 208 37.0
GSVIVG01027407001 Vitis vinifera HOM05D000183 ORTHO05D000100 2.9e-15 85.9 143 43.4
FvH4_7g17320 Fragaria vesca HOM05D000183 ORTHO05D000100 3.8e-15 85.5 208 37.0
FAN06G2596 Fragaria x ananassa HOM05D000183 ORTHO05D000100 3.8e-15 85.5 208 37.0
FAN06G4893 Fragaria x ananassa HOM05D000183 ORTHO05D000100 3.8e-15 85.5 208 37.0
FAN10G0493 Fragaria x ananassa HOM05D000183 ORTHO05D000100 3.8e-15 85.5 208 37.0
FAN10G1020 Fragaria x ananassa HOM05D000183 ORTHO05D000100 3.8e-15 85.5 208 37.0
Hund16738 Selenicereus undatus HOM05D000183 ORTHO05D000100 4.9e-15 85.1 236 36.9
COL.COLO4_06263 Corchorus olitorius HOM05D000183 ORTHO05D000100 6.4e-15 84.7 208 34.6
Peaxi162Scf00767g00212 Petunia axillaris HOM05D000183 ORTHO05D000100 6.4e-15 84.7 220 33.6
FAN01G3052 Fragaria x ananassa HOM05D000183 ORTHO05D000100 1.1e-14 84.0 208 37.0
Sabra14G0075800 Salix brachista HOM05D000183 ORTHO05D000100 1.1e-14 84.0 207 36.2
Thecc.01G336300 Theobroma cacao HOM05D000183 ORTHO05D000100 1.9e-14 83.2 211 32.2
MD00G1036300 Malus domestica HOM05D000183 ORTHO05D000100 2.4e-14 82.8 211 33.6
Atru.chr5.741 Acer truncatum HOM05D000183 ORTHO05D000100 3.2e-14 82.4 210 35.7
Duzib133G0094 Durio zibethinus HOM05D000183 ORTHO05D000100 3.2e-14 82.4 210 31.4
CAN.G1045.47 Capsicum annuum HOM05D000183 ORTHO05D000100 7.1e-14 81.3 205 36.1
Lalb_Chr17g0342891 Lupinus albus HOM05D000183 ORTHO05D000100 1.2e-13 80.5 213 31.9
Psat4g216920 Pisum sativum HOM05D000183 ORTHO05D000100 2.1e-13 79.7 211 32.7
Medtr8g026960 Medicago truncatula HOM05D000183 ORTHO05D000100 3.5e-13 79.0 211 32.2
CSS0049693 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 1.0e-12 77.4 216 31.0
Phvul.010G117200 Phaseolus vulgaris HOM05D000183 ORTHO05D000100 3.9e-12 75.5 209 33.0
TPR.G15905 Trifolium pratense HOM05D000183 ORTHO05D000100 3.9e-12 75.5 211 32.2
Lj9A602T29 Lonicera japonica HOM05D000183 ORTHO05D000100 6.7e-12 74.7 195 34.4
Solyc01g096320.3 Solanum lycopersicum HOM05D000183 ORTHO05D000100 6.7e-12 74.7 198 34.8
THA.LOC104817390 Tarenaya hassleriana HOM05D000183 ORTHO05D000100 8.7e-12 74.3 212 31.6
Sopen01g040080 Solanum pennellii HOM05D000183 ORTHO05D000100 1.1e-11 73.9 198 34.8
VMungo0331G0936 Vigna mungo HOM05D000183 ORTHO05D000100 1.5e-11 73.6 211 31.3
Gohir.D12G118100 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.9e-11 73.2 211 33.2
Carub.0005s2864 Capsella rubella HOM05D000183 ORTHO05D000100 2.5e-11 72.8 219 32.0
ClCG05G000530 Citrullus lanatus HOM05D000183 ORTHO05D000100 2.5e-11 72.8 212 32.1
Gohir.A07G135300 Gossypium hirsutum HOM05D000183 ORTHO05D000100 2.5e-11 72.8 213 31.5
Dinv32629 Davidia involucrata HOM05D000183 ORTHO05D000100 3.3e-11 72.4 210 31.9
DCAR_002986 Daucus carota HOM05D000183 ORTHO05D000100 5.6e-11 71.6 208 34.6
Lj3g0007087 Lotus japonicus HOM05D000183 ORTHO05D000100 5.6e-11 71.6 211 31.8
Gohir.A12G114800 Gossypium hirsutum HOM05D000183 ORTHO05D000100 7.4e-11 71.2 211 32.7
Eucgr.D02645 Eucalyptus grandis HOM05D000183 ORTHO05D000100 1.3e-10 70.5 207 32.9
TAR636G1571 Trochodendron aralioides HOM05D000183 ORTHO05D000100 1.3e-10 70.5 208 33.2
Glyma.07G052100 Glycine max HOM05D000183 ORTHO05D000100 1.6e-10 70.1 212 30.7
Rhsim01G0177300 Rhododendron simsii HOM05D000183 ORTHO05D000100 2.1e-10 69.7 212 31.1
THA.LOC104827637 Tarenaya hassleriana HOM05D000183 ORTHO05D000100 2.8e-10 69.3 213 30.5
Glyma.16G021000 Glycine max HOM05D000183 ORTHO05D000100 3.7e-10 68.9 213 31.0
Gorai.001G152200 Gossypium raimondii HOM05D000183 ORTHO05D000100 3.7e-10 68.9 213 31.0
Nn3g18813 Nelumbo nucifera HOM05D000183 ORTHO05D000100 4.8e-10 68.6 210 31.0
Lalb_Chr10g0100771 Lupinus albus HOM05D000183 ORTHO05D000100 6.2e-10 68.2 213 30.5
PGSC0003DMG400000248 Solanum tuberosum HOM05D000183 ORTHO05D000100 8.1e-10 67.8 213 31.0
Gohir.D07G140200 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.4e-09 67.0 213 31.0
TAR375G0348 Trochodendron aralioides HOM05D000183 ORTHO05D000100 2.4e-09 66.2 138 35.5
CsaV3_3G007750 Cucumis sativus L. HOM05D000183 ORTHO05D000100 3.1e-09 65.9 212 28.8
BraA04t15804Z Brassica rapa HOM05D000183 ORTHO05D000100 5.3e-09 65.1 207 28.5
Cpa.g.sc144.7 Carica papaya HOM05D000183 ORTHO05D000100 5.3e-09 65.1 204 30.9
Gorai.008G128000 Gossypium raimondii HOM05D000183 ORTHO05D000100 6.9e-09 64.7 208 31.7
Sc23g0001920 Simmondsia chinensis HOM05D000183 ORTHO05D000100 6.9e-09 64.7 217 30.9
Sp5g01460 Schrenkiella parvula HOM05D000183 ORTHO05D000100 1.2e-08 63.9 205 29.8
Sed0009692 Sechium edule HOM05D000183 ORTHO05D000100 2.0e-08 63.2 213 31.9
BcaC07g40679 Brassica carinata HOM05D000183 ORTHO05D000100 2.6e-08 62.8 200 32.5
A04p00850 Brassica napus HOM05D000183 ORTHO05D000100 2.6e-08 62.8 215 27.9
C08p36760 Brassica napus HOM05D000183 ORTHO05D000100 2.6e-08 62.8 200 32.5
BolC8t51256H Brassica oleracea HOM05D000183 ORTHO05D000100 2.6e-08 62.8 200 32.5
Dinv29230 Davidia involucrata HOM05D000183 ORTHO05D000100 2.6e-08 62.8 208 29.8
A09p53930 Brassica napus HOM05D000183 ORTHO05D000100 3.4e-08 62.4 200 30.5
BolC4t24635H Brassica oleracea HOM05D000183 ORTHO05D000100 3.4e-08 62.4 207 28.0
BraA09t40809Z Brassica rapa HOM05D000183 ORTHO05D000100 3.4e-08 62.4 200 30.5
Aa31LG1G28070 Aethionema arabicum HOM05D000183 ORTHO05D000100 5.8e-08 61.6 216 31.5
BcaC02g10260 Brassica carinata HOM05D000183 ORTHO05D000100 7.6e-08 61.2 207 27.5
C04p30990 Brassica napus HOM05D000183 ORTHO05D000100 7.6e-08 61.2 207 27.5
AL5G44470 Arabidopsis lyrata HOM05D000183 ORTHO05D000100 9.9e-08 60.8 207 30.9
Thhalv10006221m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 1.3e-07 60.5 202 30.2
AT3G61890 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 2.2e-07 59.7 207 29.5
BcaC07g42592 Brassica carinata HOM05D000183 ORTHO05D000100 2.9e-07 59.3 201 30.3
Lalb_Chr04g0254291 Lupinus albus HOM05D000183 ORTHO05D000100 2.9e-07 59.3 185 33.0
BcaB02g08133 Brassica carinata HOM05D000183 ORTHO05D000100 3.8e-07 58.9 207 28.0
Hma1.2p1_0180F.1_g079830 Hydrangea macrophylla HOM05D000183 ORTHO05D000100 3.8e-07 58.9 225 30.7
TAR374G1654 Trochodendron aralioides HOM05D000183 ORTHO05D000100 4.9e-07 58.5 211 30.3
VMungo0540G0386 Vigna mungo HOM05D000183 ORTHO05D000100 4.9e-07 58.5 215 31.6
MBI12_g05173_MAGBIO Magnolia biondii HOM05D000183 ORTHO05D000100 6.4e-07 58.2 211 33.2
Hma1.2p1_0094F.1_g047200 Hydrangea macrophylla HOM05D000183 ORTHO05D000100 8.4e-07 57.8 201 32.3
Oeu007865.1 Olea europaea HOM05D000183 ORTHO05D000100 8.4e-07 57.8 214 29.0
MELO3C005992.2 Cucumis melo HOM05D000183 ORTHO05D000100 1.9e-06 56.6 214 29.4


User provided reference genes

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