Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.5e-97 357.8 171 100.0
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 7.3e-47 191.0 171 52.0
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 8.4e-19 97.8 153 35.9
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.4e-18 97.1 153 36.6
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 5.5e-18 95.1 153 33.3
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 7.1e-18 94.7 137 35.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.6e-17 93.6 137 34.3
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 1.6e-17 93.6 153 35.3
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.7e-17 92.8 137 35.0
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.7e-17 92.8 137 35.0
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 3.5e-17 92.4 155 33.5
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 3.5e-17 92.4 150 34.7
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 3.5e-17 92.4 153 34.0
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 4.6e-17 92.0 153 32.7
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 6.0e-17 91.7 137 35.0
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 6.0e-17 91.7 137 35.0
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 6.0e-17 91.7 137 35.0
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 6.0e-17 91.7 137 34.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 6.0e-17 91.7 154 34.4
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 7.9e-17 91.3 137 34.3
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 7.9e-17 91.3 137 34.3
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 7.9e-17 91.3 151 33.8
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.0e-16 90.9 151 33.8
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 1.8e-16 90.1 154 33.8
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 2.3e-16 89.7 137 34.3
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 2.3e-16 89.7 137 34.3
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 2.3e-16 89.7 137 34.3
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 2.3e-16 89.7 137 33.6
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 3.0e-16 89.4 153 32.7
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 3.9e-16 89.0 153 32.0
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 3.9e-16 89.0 153 33.3
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 3.9e-16 89.0 153 33.3
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 5.1e-16 88.6 137 34.3
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 5.1e-16 88.6 137 33.6
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 6.7e-16 88.2 153 32.7
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 6.7e-16 88.2 153 30.7
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 8.7e-16 87.8 153 33.3
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 8.7e-16 87.8 153 32.7
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 1.1e-15 87.4 137 32.8
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 1.1e-15 87.4 153 32.7
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 1.1e-15 87.4 153 32.0
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 1.5e-15 87.0 153 31.4
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 3.3e-15 85.9 146 33.6
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 3.3e-15 85.9 153 32.7
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 4.3e-15 85.5 156 33.3
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 4.3e-15 85.5 156 34.0
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-15 85.1 153 34.0
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 7.4e-15 84.7 149 31.5
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 7.4e-15 84.7 157 33.8
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 7.4e-15 84.7 153 31.4
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 9.6e-15 84.3 153 31.4
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.3e-14 84.0 155 33.5
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 2.1e-14 83.2 155 31.6
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 2.1e-14 83.2 158 32.3
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.1e-14 83.2 153 30.1
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 2.8e-14 82.8 154 32.5
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.8e-14 82.8 153 30.1
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 2.8e-14 82.8 153 30.1
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 3.7e-14 82.4 158 31.6
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 3.7e-14 82.4 158 32.3
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 3.7e-14 82.4 158 32.3
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 4.8e-14 82.0 153 31.4
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.8e-14 82.0 157 28.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 6.2e-14 81.6 153 28.8
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 6.2e-14 81.6 138 32.6
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 6.2e-14 81.6 153 30.7
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 6.2e-14 81.6 163 31.9
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.4e-13 80.5 146 33.6
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.4e-13 80.5 175 28.0
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 2.4e-13 79.7 141 34.0
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.4e-13 79.7 154 29.9
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 2.4e-13 79.7 153 28.8
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 3.1e-13 79.3 146 30.1
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 4.1e-13 79.0 145 33.8
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 6.9e-13 78.2 154 30.5
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 6.9e-13 78.2 153 28.8
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 6.9e-13 78.2 147 32.7
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 9.0e-13 77.8 146 32.2
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 9.0e-13 77.8 153 30.1
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 9.0e-13 77.8 188 27.7
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 9.0e-13 77.8 148 28.4
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 1.2e-12 77.4 153 32.0
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 2.0e-12 76.6 150 33.3
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 7.6e-12 74.7 171 30.4
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 7.6e-12 74.7 171 30.4
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 1.0e-11 74.3 143 32.2
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.3e-11 73.9 154 29.9
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 2.9e-11 72.8 154 27.9
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 3.8e-11 72.4 154 30.5
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 6.5e-11 71.6 138 29.7
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 8.4e-11 71.2 153 28.1
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.9e-10 70.1 139 31.7
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.5e-10 69.7 150 31.3
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 3.2e-10 69.3 146 28.8
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.2e-10 69.3 110 35.5
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 5.5e-10 68.6 150 29.3
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 7.1e-10 68.2 143 32.2
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-10 67.8 140 30.7
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 9.3e-10 67.8 154 29.2
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.6e-09 67.0 93 39.8
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 7.9e-09 64.7 166 26.5
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 1.3e-08 63.9 93 33.3
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-08 63.2 162 29.0
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 3.0e-08 62.8 139 30.2
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.9e-07 60.1 120 30.8
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 9.7e-07 57.8 111 30.6
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 2.2e-06 56.6 116 29.3
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 2.8e-06 56.2 101 30.7


User provided reference genes

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