Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 2.3e-35 151.8 81 100.0
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 6.8e-27 123.6 79 82.3
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.8e-24 115.5 79 78.5
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 3.2e-16 88.2 81 61.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 3.5e-15 84.7 71 59.2
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 7.8e-15 83.6 79 54.4
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 7.8e-15 83.6 71 59.2
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.3e-14 82.8 64 68.8
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.7e-14 82.4 73 58.9
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.7e-14 82.4 65 63.1
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 2.3e-14 82.0 75 62.7
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 3.9e-14 81.3 79 58.2
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.1e-13 79.7 79 58.2
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.9e-13 79.0 79 57.0
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.9e-13 79.0 79 57.0
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 2.5e-13 78.6 63 65.1
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 3.3e-13 78.2 66 63.6
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 3.3e-13 78.2 80 55.0
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 4.3e-13 77.8 71 62.0
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 4.3e-13 77.8 71 57.7
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 4.3e-13 77.8 79 57.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 4.3e-13 77.8 78 59.0
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.2e-12 76.3 80 55.0
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 1.2e-12 76.3 80 55.0
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.6e-12 75.9 53 69.8
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.6e-12 75.9 80 55.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 2.1e-12 75.5 80 53.8
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 2.8e-12 75.1 67 59.7
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 3.6e-12 74.7 71 54.9
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.6e-12 74.7 80 52.5
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 3.6e-12 74.7 62 61.3
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 3.6e-12 74.7 67 53.7
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 4.7e-12 74.3 82 56.1
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 4.7e-12 74.3 72 56.9
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.7e-12 74.3 67 53.7
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 4.7e-12 74.3 61 60.7
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 6.2e-12 73.9 80 51.2
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 6.2e-12 73.9 67 53.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 8.1e-12 73.6 53 64.2
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 8.1e-12 73.6 53 64.2
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 8.1e-12 73.6 80 52.5
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.4e-11 72.8 71 54.9
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.4e-11 72.8 67 52.2
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.8e-11 72.4 80 51.2
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.8e-11 72.4 56 62.5
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 2.3e-11 72.0 72 55.6
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 3.1e-11 71.6 84 50.0
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 3.1e-11 71.6 69 56.5
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 4.0e-11 71.2 85 45.9
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 5.2e-11 70.9 70 54.3
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 6.8e-11 70.5 73 54.8
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 6.8e-11 70.5 80 51.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 6.8e-11 70.5 80 51.2
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 6.8e-11 70.5 56 58.9
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 8.9e-11 70.1 62 56.5
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.2e-10 69.7 56 60.7
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.2e-10 69.7 81 51.9
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.2e-10 69.7 56 57.1
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.5e-10 69.3 73 53.4
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 1.5e-10 69.3 81 51.9
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.5e-10 69.3 71 47.9
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.0e-10 68.9 53 64.2
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 2.0e-10 68.9 54 61.1
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 2.6e-10 68.6 80 48.8
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 2.6e-10 68.6 52 69.2
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 3.4e-10 68.2 80 48.8
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 5.8e-10 67.4 57 59.6
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 5.8e-10 67.4 57 59.6
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.5e-10 67.0 86 50.0
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.5e-10 67.0 86 50.0
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 7.5e-10 67.0 52 63.5
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 7.5e-10 67.0 73 52.1
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 9.9e-10 66.6 51 58.8
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.9e-09 65.1 81 53.1
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 2.9e-09 65.1 51 64.7
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.9e-09 65.1 53 58.5
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.9e-09 65.1 56 53.6
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 8.3e-09 63.5 53 58.5
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.4e-08 62.8 82 47.6
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.4e-08 62.8 82 50.0
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 1.4e-08 62.8 51 56.9
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.9e-08 62.4 56 51.8
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 2.4e-08 62.0 51 58.8
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 3.2e-08 61.6 51 58.8
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 4.1e-08 61.2 57 56.1
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 4.1e-08 61.2 51 58.8
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 4.1e-08 61.2 56 50.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 4.1e-08 61.2 53 56.6
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 5.4e-08 60.8 51 56.9
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 9.2e-08 60.1 51 60.8
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.2e-07 59.7 54 57.4
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.2e-07 59.7 61 50.8
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 1.6e-07 59.3 56 48.2
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 4.6e-07 57.8 65 52.3
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 6.0e-07 57.4 54 50.0
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 6.0e-07 57.4 53 50.9
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.0e-06 56.6 54 55.6
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.0e-06 56.6 51 56.9
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 3.0e-06 55.1 51 54.9
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 3.9e-06 54.7 69 47.8
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 3.9e-06 54.7 51 54.9
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 6.6e-06 53.9 51 52.9
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 6.6e-06 53.9 53 49.1


User provided reference genes

Program Settings