Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.5e-242 842.4 428 100.0
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 1.0e-206 723.4 436 85.8
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.8e-196 688.7 455 78.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 2.2e-193 679.1 445 77.3
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 3.5e-191 671.8 455 76.0
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 3.3e-189 665.2 436 79.1
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 7.4e-189 664.1 456 74.1
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 6.9e-187 657.5 451 74.7
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 4.9e-185 651.4 452 72.1
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 5.5e-184 647.9 452 73.2
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 5.5e-184 647.9 450 75.3
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 1.6e-183 646.4 456 73.2
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 2.7e-183 645.6 452 72.1
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.7e-183 645.6 440 74.8
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 3.5e-183 645.2 452 72.1
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 7.9e-183 644.0 447 75.4
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 1.3e-182 643.3 453 72.4
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 1.8e-182 642.9 434 75.1
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 5.1e-182 641.3 440 74.3
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.5e-181 639.8 451 72.7
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 3.3e-181 638.6 440 74.8
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 3.3e-181 638.6 451 72.7
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 7.4e-181 637.5 453 72.6
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 1.6e-180 636.3 428 73.8
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.6e-180 636.3 427 74.5
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 2.2e-180 636.0 444 72.1
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 2.2e-180 636.0 443 74.0
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 3.7e-180 635.2 452 73.0
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 4.8e-180 634.8 427 74.0
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 8.2e-180 634.0 452 72.8
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 8.2e-180 634.0 452 72.8
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.1e-179 633.6 427 74.0
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.4e-179 633.3 452 72.8
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 2.4e-179 632.5 427 74.0
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 3.1e-179 632.1 441 73.0
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 6.9e-179 630.9 426 74.9
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 6.9e-179 630.9 429 74.4
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 9.0e-179 630.6 447 72.9
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 1.2e-178 630.2 414 76.3
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 1.5e-178 629.8 453 71.5
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 1.5e-178 629.8 460 70.9
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 2.0e-178 629.4 449 71.7
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.0e-178 629.4 453 71.3
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 2.0e-178 629.4 439 71.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 2.6e-178 629.0 453 71.1
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.6e-178 629.0 426 74.2
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 2.6e-178 629.0 450 71.6
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 4.5e-178 628.2 427 73.5
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 4.5e-178 628.2 449 71.3
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 1.0e-177 627.1 433 73.4
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 2.9e-177 625.5 440 72.0
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 3.8e-177 625.2 439 71.5
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 6.5e-177 624.4 425 74.4
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 8.5e-177 624.0 436 72.9
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.1e-176 623.6 436 72.7
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.1e-176 623.6 450 72.4
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.4e-176 623.2 391 79.0
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.9e-176 622.9 442 72.4
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 1.9e-176 622.9 486 68.1
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 2.5e-176 622.5 433 72.3
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 2.1e-175 619.4 436 72.7
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 2.7e-175 619.0 434 72.4
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 3.6e-175 618.6 440 70.0
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 4.6e-175 618.2 415 75.2
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 7.9e-175 617.5 426 72.1
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.0e-174 617.1 436 72.2
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 1.0e-174 617.1 474 68.1
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 1.8e-174 616.3 438 72.8
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 3.0e-174 615.5 429 72.7
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 3.0e-174 615.5 436 71.8
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.9e-174 615.1 440 70.9
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 5.1e-174 614.8 460 67.8
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 6.7e-174 614.4 427 71.9
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 8.8e-174 614.0 452 71.2
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 8.8e-174 614.0 440 70.7
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.1e-173 613.6 430 72.6
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 1.9e-173 612.8 441 71.2
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 2.5e-173 612.5 440 71.4
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 3.3e-173 612.1 429 72.7
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 3.3e-173 612.1 440 70.7
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 4.3e-173 611.7 429 72.5
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 4.3e-173 611.7 431 72.2
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 5.7e-173 611.3 433 71.1
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.3e-172 610.1 440 70.9
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.3e-172 610.1 440 70.9
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.7e-172 609.8 440 70.9
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.7e-172 609.8 440 70.9
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 2.2e-172 609.4 440 71.1
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 6.3e-172 607.8 418 73.2
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 8.2e-172 607.4 413 73.4
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.4e-171 606.7 432 70.8
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 4.1e-171 605.1 450 68.7
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 4.1e-171 605.1 432 70.6
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 5.3e-171 604.7 460 67.0
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 6.9e-171 604.4 415 73.3
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 9.1e-171 604.0 430 71.4
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 9.1e-171 604.0 430 71.4
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 5.0e-169 598.2 413 74.3
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 5.0e-169 598.2 413 74.3
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 5.5e-168 594.7 382 77.2
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.7e-167 592.4 415 72.5
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 2.7e-167 592.4 501 63.7
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.0e-166 590.5 448 67.4
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 3.0e-166 589.0 436 70.0
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.9e-166 588.6 382 76.2
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 7.4e-165 584.3 413 71.7
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.0e-158 563.9 437 66.4
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 3.3e-157 558.9 411 69.6
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 9.7e-157 557.4 428 66.6
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.3e-156 557.0 444 64.9
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 1.4e-155 553.5 413 68.8
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 7.0e-155 551.2 519 59.2
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 1.3e-153 547.0 415 68.9
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 1.2e-149 533.9 450 63.8
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 7.5e-149 531.2 387 70.8
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 3.1e-147 525.8 453 62.9
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 3.1e-147 525.8 439 63.3
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 4.2e-144 515.4 477 58.9
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 4.1e-139 498.8 358 70.4
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 3.5e-138 495.7 428 57.7
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 1.1e-128 464.2 409 57.2
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 2.7e-122 443.0 360 62.5
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 2.5e-120 436.4 580 46.7
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.8e-118 430.3 329 66.9
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.9e-112 410.2 310 68.7
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.2e-106 391.0 442 49.5
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.5e-101 374.0 361 55.4
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.0e-101 373.6 412 51.7
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 3.0e-97 359.8 276 67.8
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 4.3e-80 302.8 410 42.7
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.0e-78 296.2 250 63.2
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.3e-72 276.2 188 75.5
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 8.4e-68 261.9 265 55.1
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 2.4e-62 243.8 172 70.3
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 3.1e-62 243.4 334 42.5
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 5.0e-52 209.5 161 67.1
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 9.1e-46 188.7 444 34.0
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.2e-43 180.3 117 76.1
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.5e-29 133.7 72 84.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 1.9e-27 127.9 69 82.6
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 1.0e-25 122.1 81 80.2
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 6.8e-25 119.4 83 69.9
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 5.9e-21 106.3 96 61.5
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 1.7e-20 104.8 76 69.7
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 6.1e-18 96.3 66 78.8
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 6.3e-15 86.3 277 27.4
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 6.6e-12 76.3 82 53.7
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 2.0e-08 64.7 51 60.8
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 2.2e-07 61.2 86 44.2
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 2.2e-07 61.2 86 44.2


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