Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2032 Erigeron canadensis HOM05D004629 ORTHO05D189049 6.1e-45 183.7 90 100.0
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.2e-11 73.2 43 79.1
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 4.4e-11 71.2 65 55.4
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 5.8e-11 70.9 65 55.4
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 5.8e-11 70.9 43 74.4
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 5.8e-11 70.9 43 76.7
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 5.8e-11 70.9 43 74.4
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 7.6e-11 70.5 43 74.4
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 7.6e-11 70.5 43 76.7
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 7.6e-11 70.5 43 76.7
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 7.6e-11 70.5 43 76.7
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 7.6e-11 70.5 43 76.7
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 1.3e-10 69.7 43 74.4
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 1.3e-10 69.7 43 74.4
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 1.3e-10 69.7 43 74.4
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 1.3e-10 69.7 43 74.4
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 1.7e-10 69.3 43 74.4
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 1.7e-10 69.3 65 53.8
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 2.2e-10 68.9 65 52.3
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 2.2e-10 68.9 43 74.4
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 2.9e-10 68.6 65 52.3
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 2.9e-10 68.6 65 52.3
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 2.9e-10 68.6 65 52.3
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 2.9e-10 68.6 43 74.4
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.9e-10 68.6 65 52.3
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 3.8e-10 68.2 43 72.1
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 3.8e-10 68.2 43 72.1
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 3.8e-10 68.2 43 72.1
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 3.8e-10 68.2 43 72.1
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 3.8e-10 68.2 42 73.8
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 3.8e-10 68.2 65 52.3
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 3.8e-10 68.2 43 74.4
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 4.9e-10 67.8 43 69.8
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 4.9e-10 67.8 43 72.1
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 4.9e-10 67.8 65 52.3
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 4.9e-10 67.8 65 52.3
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 4.9e-10 67.8 43 72.1
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 4.9e-10 67.8 43 72.1
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 6.4e-10 67.4 65 52.3
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 6.4e-10 67.4 65 52.3
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 6.4e-10 67.4 65 52.3
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 6.4e-10 67.4 43 72.1
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 8.4e-10 67.0 43 72.1
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 8.4e-10 67.0 43 72.1
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 8.4e-10 67.0 43 72.1
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 8.4e-10 67.0 43 72.1
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 8.4e-10 67.0 43 72.1
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 65.1
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 1.1e-09 66.6 43 69.8
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 69.8
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 1.1e-09 66.6 43 72.1
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 1.4e-09 66.2 65 50.8
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 1.4e-09 66.2 43 69.8
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 1.4e-09 66.2 43 69.8
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 1.9e-09 65.9 43 67.4
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.9e-09 65.9 43 67.4
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.9e-09 65.9 43 69.8
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 1.9e-09 65.9 43 67.4
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 1.9e-09 65.9 43 72.1
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 2.4e-09 65.5 43 69.8
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 3.2e-09 65.1 43 67.4
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 3.2e-09 65.1 43 72.1
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 3.2e-09 65.1 43 67.4
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 5.4e-09 64.3 42 69.0
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 7.1e-09 63.9 43 69.8
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 9.3e-09 63.5 43 67.4
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 1.6e-08 62.8 38 73.7
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.6e-08 62.8 35 80.0
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 2.1e-08 62.4 65 46.2
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 2.1e-08 62.4 37 75.7
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 3.5e-08 61.6 37 73.0
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 3.5e-08 61.6 87 44.8
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 6.0e-08 60.8 37 73.0
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 7.8e-08 60.5 43 60.5
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 7.8e-08 60.5 35 74.3
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 3.9e-07 58.2 53 52.8
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.9e-06 55.8 43 62.8
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 7.3e-06 53.9 39 51.3


User provided reference genes

Program Settings