Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 9.3e-139 496.9 255 100.0
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.5e-120 436.4 259 87.6
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.0e-109 399.4 255 82.4
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 6.3e-103 377.9 257 76.3
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.5e-99 365.9 257 73.9
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 3.2e-99 365.5 255 72.2
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.5e-99 364.8 257 73.2
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 2.7e-98 362.5 255 73.3
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 2.7e-98 362.5 256 72.3
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.6e-98 362.1 257 70.8
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 4.7e-98 361.7 257 70.4
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.0e-97 359.0 255 72.5
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 3.9e-97 358.6 257 72.0
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.9e-97 358.6 255 72.5
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 3.9e-97 358.6 259 72.2
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 8.8e-97 357.5 256 71.5
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 1.1e-96 357.1 255 73.3
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.5e-96 356.7 260 71.5
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.0e-96 356.3 257 69.6
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 3.3e-96 355.5 256 71.5
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 5.7e-96 354.8 255 71.4
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 5.7e-96 354.8 255 72.2
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 5.7e-96 354.8 261 68.6
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 5.7e-96 354.8 261 68.6
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 1.7e-95 353.2 257 70.0
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.8e-95 352.4 260 69.2
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 6.3e-95 351.3 257 70.8
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 1.1e-94 350.5 255 71.0
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.4e-94 350.1 255 69.4
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 1.4e-94 350.1 255 73.7
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.8e-94 349.7 256 70.3
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 4.1e-94 348.6 257 71.2
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 4.1e-94 348.6 254 72.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 5.3e-94 348.2 280 65.7
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 7.0e-94 347.8 256 71.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 9.1e-94 347.4 260 69.6
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.2e-93 347.1 255 72.2
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.2e-93 347.1 257 68.9
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.2e-93 347.1 260 69.6
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 1.6e-93 346.7 253 72.7
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.6e-93 346.7 256 71.1
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.0e-93 346.3 258 70.5
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 2.6e-93 345.9 258 70.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 2.6e-93 345.9 260 69.2
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 2.6e-93 345.9 253 72.7
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 4.5e-93 345.1 257 71.2
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 5.9e-93 344.7 258 70.9
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 5.9e-93 344.7 255 69.4
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 7.7e-93 344.4 257 70.4
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.0e-92 344.0 255 70.6
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 1.3e-92 343.6 254 70.9
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.3e-92 343.6 254 68.1
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.7e-92 343.2 257 68.9
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 2.2e-92 342.8 259 71.0
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 2.2e-92 342.8 257 71.6
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.8e-92 342.0 258 70.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.8e-92 342.0 258 70.2
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 3.8e-92 342.0 258 69.0
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 5.0e-92 341.7 257 70.4
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 5.0e-92 341.7 257 70.4
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 5.0e-92 341.7 257 70.8
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 6.5e-92 341.3 254 68.9
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 6.5e-92 341.3 257 69.6
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 6.5e-92 341.3 257 69.6
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 6.5e-92 341.3 256 69.9
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 6.5e-92 341.3 259 69.9
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 8.5e-92 340.9 257 69.6
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 1.1e-91 340.5 223 78.0
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 1.1e-91 340.5 257 68.1
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.1e-91 340.5 257 70.0
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 1.1e-91 340.5 260 68.5
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.9e-91 339.7 257 69.3
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 4.2e-91 338.6 260 69.2
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 7.2e-91 337.8 257 70.0
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 7.2e-91 337.8 257 69.6
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 9.4e-91 337.4 252 70.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.2e-90 337.0 255 67.5
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 8.0e-90 334.3 305 60.0
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.0e-89 334.0 253 67.6
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.4e-89 333.6 257 67.3
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 1.8e-89 333.2 257 66.5
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.0e-89 332.0 259 68.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.2e-89 331.6 272 66.2
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 5.2e-89 331.6 257 66.9
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.2e-88 330.5 250 70.8
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 5.7e-88 328.2 258 66.7
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 5.7e-88 328.2 242 67.8
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 6.3e-87 324.7 260 63.5
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 8.3e-87 324.3 278 64.4
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.4e-86 323.6 267 65.5
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 1.8e-86 323.2 239 71.1
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 2.0e-85 319.7 257 65.4
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 2.0e-85 319.7 242 68.2
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.7e-84 316.6 254 62.6
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.5e-84 314.3 242 68.6
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 9.4e-83 310.8 217 71.0
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 5.2e-81 305.1 237 68.8
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 9.8e-80 300.8 241 66.8
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 7.7e-77 291.2 174 80.5
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.3e-76 290.4 256 59.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.8e-76 288.9 170 83.5
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 5.0e-76 288.5 254 61.4
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 3.3e-75 285.8 253 58.9
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.3e-73 279.6 261 60.9
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 5.2e-73 278.5 208 69.7
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 8.9e-73 277.7 222 64.4
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 1.3e-68 263.8 160 81.9
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 2.3e-68 263.1 237 59.1
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 9.5e-67 257.7 205 66.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 5.2e-65 251.9 247 54.7
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 5.2e-65 251.9 195 67.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 7.5e-64 248.1 226 61.1
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 7.0e-62 241.5 252 54.4
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 1.7e-60 236.9 253 51.4
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.5e-59 233.0 188 63.3
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 3.4e-56 222.6 215 55.8
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 6.4e-55 218.4 223 57.0
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 2.3e-52 209.9 115 87.0
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.5e-51 207.2 257 50.2
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 4.4e-48 195.7 167 62.9
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.7e-44 183.7 101 85.1
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.9e-38 163.7 256 38.3
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 2.4e-38 163.3 150 59.3
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 8.7e-36 154.8 144 60.4
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.8e-32 142.1 143 55.9
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 3.5e-29 132.9 87 72.4
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.9e-27 127.1 65 89.2
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 3.8e-23 112.8 57 87.7
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 8.4e-23 111.7 127 51.2
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.1e-19 101.3 54 81.5
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 1.4e-17 94.4 72 72.2
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.3e-15 87.8 79 57.0
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.1e-12 75.9 75 52.0
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 8.7e-12 75.1 75 56.0
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 8.7e-12 75.1 60 66.7
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 5.7e-11 72.4 74 54.1
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 1.3e-07 61.2 32 84.4
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 8.4e-07 58.5 105 36.2
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.4e-06 57.8 77 53.2
CAN.G129.52 Capsicum annuum HOM05D001089 ORTHO05D000920 9.3e-06 55.1 30 76.7


User provided reference genes

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