Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 7.7e-71 270.4 138 100.0
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 1.5e-63 246.1 138 89.1
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 3.3e-58 228.4 138 85.5
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.7e-57 226.1 138 85.5
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 8.2e-57 223.8 138 81.9
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.1e-56 221.5 138 81.2
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 5.3e-56 221.1 137 78.1
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.2e-55 219.9 138 81.2
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.2e-55 219.9 138 81.2
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.5e-55 219.5 138 81.2
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 2.0e-55 219.2 138 81.9
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 2.6e-55 218.8 138 80.4
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 2.6e-55 218.8 138 81.9
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.3e-54 216.5 133 80.5
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 2.9e-54 215.3 138 81.2
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 2.9e-54 215.3 138 81.9
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 2.9e-54 215.3 138 79.7
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 5.0e-54 214.5 135 80.7
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 6.5e-54 214.2 138 79.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 8.5e-54 213.8 138 78.3
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.5e-53 212.2 138 77.5
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 2.5e-53 212.2 138 80.4
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 3.2e-53 211.8 133 77.4
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 9.4e-53 210.3 140 77.1
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 1.2e-52 209.9 138 76.1
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.6e-52 209.5 136 78.7
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 1.6e-52 209.5 138 73.9
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.1e-52 209.1 138 78.3
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.1e-52 209.1 138 78.3
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 3.6e-52 208.4 138 76.8
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 4.7e-52 208.0 136 74.3
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 4.7e-52 208.0 138 77.5
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 4.7e-52 208.0 138 77.5
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 8.0e-52 207.2 133 75.9
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 8.0e-52 207.2 125 84.8
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.0e-51 206.8 138 74.6
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 1.8e-51 206.1 138 72.5
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 2.3e-51 205.7 140 76.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 3.0e-51 205.3 138 77.5
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 3.0e-51 205.3 138 77.5
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 3.0e-51 205.3 138 76.1
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 3.9e-51 204.9 138 75.4
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 5.2e-51 204.5 138 76.8
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 5.2e-51 204.5 138 75.4
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 6.7e-51 204.1 132 76.5
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 6.7e-51 204.1 138 75.4
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 6.7e-51 204.1 138 78.3
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 6.7e-51 204.1 133 74.4
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 6.7e-51 204.1 138 74.6
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 1.5e-50 203.0 124 79.0
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.5e-50 203.0 138 76.8
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.5e-50 203.0 138 74.6
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 2.6e-50 202.2 137 75.2
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.3e-50 201.8 129 78.3
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 3.3e-50 201.8 165 67.3
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 4.4e-50 201.4 137 76.6
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 4.4e-50 201.4 138 76.1
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 7.4e-50 200.7 139 71.2
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 9.7e-50 200.3 138 73.9
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.3e-49 199.9 139 74.1
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 1.7e-49 199.5 137 75.2
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.7e-49 199.5 122 79.5
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 2.2e-49 199.1 139 74.1
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.2e-49 199.1 138 73.9
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 2.2e-49 199.1 138 73.9
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 2.8e-49 198.7 138 73.9
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 2.8e-49 198.7 137 75.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 3.7e-49 198.4 137 74.5
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.7e-49 198.4 137 75.2
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 3.7e-49 198.4 137 70.8
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 4.8e-49 198.0 138 71.7
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 4.8e-49 198.0 138 71.7
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 4.8e-49 198.0 138 71.7
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 6.3e-49 197.6 139 72.7
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 8.2e-49 197.2 132 75.0
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 8.2e-49 197.2 132 75.0
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 8.2e-49 197.2 132 75.0
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 8.2e-49 197.2 138 71.0
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 8.2e-49 197.2 125 80.0
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.1e-48 196.8 138 71.7
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-48 196.4 132 75.0
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 3.1e-48 195.3 132 74.2
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 4.1e-48 194.9 138 73.9
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 3.5e-47 191.8 118 80.5
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 4.5e-47 191.4 137 73.0
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 7.7e-47 190.7 119 77.3
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.0e-46 190.3 133 70.7
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.3e-46 189.9 142 71.1
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 2.2e-46 189.1 132 72.7
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 3.8e-46 188.3 133 72.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 6.5e-46 187.6 136 70.6
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 6.5e-46 187.6 138 68.8
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 8.5e-46 187.2 136 69.9
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 8.5e-46 187.2 137 70.1
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 1.5e-45 186.4 136 69.9
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 7.2e-45 184.1 132 72.0
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 7.2e-45 184.1 107 83.2
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 7.2e-45 184.1 140 67.9
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 1.2e-44 183.3 138 71.0
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 2.1e-44 182.6 123 75.6
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.7e-44 182.2 131 68.7
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 2.7e-44 182.2 125 74.4
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 6.1e-44 181.0 136 68.4
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 5.2e-43 177.9 131 67.9
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 5.7e-42 174.5 114 75.4
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 3.5e-39 165.2 123 68.3
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 4.5e-39 164.9 118 70.3
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.2e-38 162.5 114 70.2
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 4.2e-37 158.3 139 60.4
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 4.2e-37 158.3 140 62.1
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 2.6e-34 149.1 129 58.9
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 2.2e-33 146.0 142 58.5
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 2.4e-32 142.5 113 64.6
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 3.1e-32 142.1 140 56.4
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.7e-31 139.0 131 60.3
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 3.5e-31 138.7 118 61.0
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.0e-27 127.1 84 77.4
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-27 126.7 117 60.7
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.2e-26 123.6 102 58.8
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.5e-26 123.2 135 51.9
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 3.4e-26 122.1 125 56.0
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 4.9e-25 118.2 122 52.5
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 5.4e-24 114.8 99 58.6
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.7e-23 112.5 131 49.6
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.5e-21 105.9 70 74.3
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 9.5e-21 104.0 80 70.0
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.4e-19 100.1 85 62.4
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-16 89.7 138 38.4
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.3e-11 72.8 180 32.8
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-08 63.5 41 70.7
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 5.4e-08 61.6 126 36.5
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 6.0e-07 58.2 35 68.6
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 1.0e-06 57.4 47 72.3
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 2.3e-06 56.2 121 33.9


User provided reference genes

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