Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 8.0e-46 187.2 129 100.0
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 5.7e-44 181.0 129 80.6
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 2.8e-43 178.7 129 79.1
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 3.7e-43 178.3 129 79.1
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 3.7e-43 178.3 129 79.1
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 3.7e-43 178.3 129 78.3
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 6.3e-43 177.6 129 88.4
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 8.2e-43 177.2 129 78.3
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 8.2e-43 177.2 129 78.3
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 1.8e-42 176.0 127 79.5
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 2.4e-42 175.6 129 83.7
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 2.4e-42 175.6 129 77.5
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 5.3e-42 174.5 129 76.7
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 7.0e-42 174.1 129 76.0
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 1.6e-41 172.9 129 76.7
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 1.6e-41 172.9 127 78.0
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 1.6e-41 172.9 129 76.0
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 2.0e-41 172.6 130 76.9
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 2.0e-41 172.6 128 76.6
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 2.7e-41 172.2 129 76.0
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 2.7e-41 172.2 130 88.5
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 3.5e-41 171.8 129 76.0
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 4.5e-41 171.4 129 76.0
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 5.9e-41 171.0 129 74.4
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 5.9e-41 171.0 129 75.2
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 5.9e-41 171.0 129 75.2
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 7.7e-41 170.6 129 77.5
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 7.7e-41 170.6 130 86.2
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 7.7e-41 170.6 129 76.0
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 1.0e-40 170.2 129 75.2
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 1.0e-40 170.2 129 83.7
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 1.3e-40 169.9 126 77.8
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 1.3e-40 169.9 129 74.4
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 1.7e-40 169.5 129 75.2
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 1.7e-40 169.5 129 75.2
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 2.2e-40 169.1 129 77.5
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 2.2e-40 169.1 129 73.6
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 2.9e-40 168.7 129 73.6
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 2.9e-40 168.7 129 77.5
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.8e-40 168.3 132 75.0
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 3.8e-40 168.3 129 73.6
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 5.0e-40 167.9 129 83.7
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 6.5e-40 167.5 128 83.6
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 1.1e-39 166.8 128 77.3
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 1.1e-39 166.8 133 74.4
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 1.1e-39 166.8 129 72.9
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 1.5e-39 166.4 129 79.1
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 5.5e-39 164.5 129 76.0
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 7.2e-39 164.1 129 75.2
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 7.2e-39 164.1 129 76.0
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 7.2e-39 164.1 133 72.9
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 7.2e-39 164.1 129 76.0
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 7.2e-39 164.1 131 73.3
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 9.4e-39 163.7 133 72.9
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 9.4e-39 163.7 129 72.9
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 1.2e-38 163.3 130 75.4
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 1.6e-38 162.9 129 72.1
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 2.1e-38 162.5 129 75.2
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 2.1e-38 162.5 130 73.1
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 2.7e-38 162.2 130 83.1
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 2.7e-38 162.2 128 75.8
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 3.6e-38 161.8 129 74.4
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 3.6e-38 161.8 130 73.1
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 4.7e-38 161.4 126 83.3
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 8.0e-38 160.6 150 65.3
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 8.0e-38 160.6 126 72.2
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 1.0e-37 160.2 129 73.6
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 1.0e-37 160.2 129 73.6
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 1.8e-37 159.5 129 73.6
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 1.8e-37 159.5 126 70.6
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 2.3e-37 159.1 129 73.6
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 2.3e-37 159.1 126 77.8
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 3.0e-37 158.7 130 70.8
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 4.0e-37 158.3 116 79.3
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 5.2e-37 157.9 127 84.3
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 8.8e-37 157.1 132 86.4
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 8.8e-37 157.1 131 83.2
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 8.8e-37 157.1 131 83.2
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 1.2e-36 156.8 129 86.8
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 1.2e-36 156.8 132 81.8
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 2.0e-36 156.0 128 70.3
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 3.4e-36 155.2 127 68.5
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 3.4e-36 155.2 127 67.7
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 5.7e-36 154.5 132 84.1
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 5.7e-36 154.5 161 60.2
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 1.3e-35 153.3 128 80.5
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 1.3e-35 153.3 116 76.7
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.7e-35 152.9 117 74.4
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 2.8e-35 152.1 116 75.9
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 4.8e-35 151.4 121 74.4
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 4.8e-35 151.4 116 83.6
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 4.8e-35 151.4 129 83.7
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 6.3e-35 151.0 116 75.9
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 1.1e-34 150.2 132 84.1
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 1.4e-34 149.8 120 74.2
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 3.1e-34 148.7 122 72.1
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 4.1e-34 148.3 117 76.1
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 5.4e-34 147.9 121 71.9
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 5.4e-34 147.9 122 71.3
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 7.0e-34 147.5 87 93.1
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 1.2e-33 146.7 129 71.3
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.6e-33 146.4 119 73.9
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 2.0e-33 146.0 87 93.1
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 5.9e-33 144.4 116 83.6
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 1.0e-32 143.7 116 71.6
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 2.3e-32 142.5 114 71.9
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 2.3e-32 142.5 116 69.8
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 2.3e-32 142.5 131 81.7
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 3.2e-31 138.7 116 69.8
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 2.1e-30 136.0 119 80.7
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 2.1e-30 136.0 128 70.3
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 2.1e-30 136.0 114 79.8
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 1.5e-28 129.8 152 55.9
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 9.8e-28 127.1 82 87.8
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 1.3e-27 126.7 134 73.1
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 1.7e-27 126.3 85 80.0
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 1.7e-27 126.3 128 63.3
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 2.2e-27 125.9 80 85.0
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 1.1e-26 123.6 125 73.6
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 4.1e-26 121.7 85 81.2
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 5.4e-26 121.3 110 68.2
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 5.9e-25 117.9 136 71.3
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 7.8e-25 117.5 66 98.5
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 2.5e-23 112.5 68 89.7
Aa31LG6G5780 Aethionema arabicum HOM05D005404 ORTHO05D006623 4.3e-23 111.7 95 70.5
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 4.7e-22 108.2 70 85.7
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 1.2e-20 103.6 68 85.3
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.5e-20 103.2 63 90.5
CBR_g45965 Chara braunii HOM05D005404 ORTHO05D006623 4.9e-19 98.2 83 62.7
C07p15720 Brassica napus HOM05D005404 ORTHO05D006623 3.2e-18 95.5 86 67.4
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.5e-17 92.0 58 86.2
C03p76250 Brassica napus HOM05D005404 ORTHO05D006623 5.9e-17 91.3 51 98.0
ClCG01G024320 Citrullus lanatus HOM05D005404 ORTHO05D006623 2.3e-16 89.4 129 47.3
Cre12.g557800 Chlamydomonas reinhardtii HOM05D005404 ORTHO05D006623 3.0e-16 89.0 88 56.8
HPP92_021557 Vanilla planifolia HOM05D005404 ORTHO05D006623 1.5e-15 86.7 54 88.9
PRCOL_00005423 Prasinoderma coloniale HOM05D005404 ORTHO05D006623 1.2e-14 83.6 87 51.7
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 6.2e-14 81.3 71 70.4
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 4.0e-13 78.6 75 69.3
Hund21505 Selenicereus undatus HOM05D005404 ORTHO05D006623 1.3e-11 73.6 113 45.1
Nn4g23354 Nelumbo nucifera HOM05D005404 ORTHO05D006623 6.6e-08 61.2 40 85.0
arahy.Tifrunner.gnm1.ann1.HCY9BB Arachis hypogaea HOM05D005404 ORTHO05D006623 1.9e-07 59.7 60 55.0
A09p36640 Brassica napus HOM05D005404 ORTHO05D006623 2.5e-07 59.3 64 57.8
HPP92_021556 Vanilla planifolia HOM05D000864 ORTHO05D001658 1.6e-06 56.6 61 50.8


User provided reference genes

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