Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 5.2e-142 507.7 253 100.0
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 8.1e-119 430.6 239 89.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 8.7e-105 384.0 249 76.7
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.3e-104 382.1 251 76.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.1e-102 377.1 249 74.7
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 3.1e-102 375.6 241 77.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 5.3e-102 374.8 236 81.4
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.2e-101 373.6 253 74.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.5e-101 373.2 247 74.5
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.0e-100 370.5 247 74.9
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.3e-100 370.2 247 74.5
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.3e-100 370.2 245 74.7
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.7e-100 369.8 256 73.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 4.9e-100 368.2 237 77.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 4.9e-100 368.2 251 74.5
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 6.5e-100 367.9 235 77.4
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.4e-99 366.7 250 75.6
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.9e-99 366.3 248 74.2
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.2e-99 365.5 249 74.7
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 3.2e-99 365.5 249 73.1
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 4.2e-99 365.2 230 78.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 7.1e-99 364.4 231 77.9
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 9.3e-99 364.0 230 77.4
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.1e-98 362.8 237 74.7
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 2.1e-98 362.8 248 74.2
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.1e-98 362.8 248 73.0
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.1e-98 362.8 234 76.5
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.7e-98 362.5 251 74.1
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 4.6e-98 361.7 234 76.5
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 6.0e-98 361.3 247 74.9
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 6.0e-98 361.3 229 76.9
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.0e-97 360.5 247 73.7
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.3e-97 359.4 247 73.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.3e-97 359.4 246 73.6
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.3e-97 359.4 247 73.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.3e-97 359.4 244 73.4
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 3.0e-97 359.0 260 70.0
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.0e-97 359.0 247 72.9
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.9e-97 358.6 231 75.3
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 8.7e-97 357.5 272 67.6
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 8.7e-97 357.5 232 77.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.1e-96 357.1 244 73.0
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.5e-96 355.9 250 72.4
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.5e-96 355.9 253 70.0
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.5e-96 355.9 248 72.2
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.3e-96 355.5 243 73.3
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 3.3e-96 355.5 241 75.1
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 4.3e-96 355.1 246 72.4
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 5.7e-96 354.8 246 72.8
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 9.7e-96 354.0 251 71.7
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.3e-95 353.6 248 70.6
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.3e-95 353.6 244 73.4
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 3.7e-95 352.1 232 74.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.7e-95 352.1 272 66.5
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 4.8e-95 351.7 236 72.9
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.8e-95 351.7 251 71.3
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 4.8e-95 351.7 229 74.2
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.1e-94 350.5 228 76.3
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.4e-94 350.1 237 73.8
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.8e-94 349.7 253 68.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.4e-94 349.4 247 68.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.1e-94 349.0 232 74.1
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 4.1e-94 348.6 222 78.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-93 347.1 239 72.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.4e-93 345.5 238 73.1
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 5.9e-93 344.7 238 72.7
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.0e-92 344.0 240 71.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.3e-92 343.6 233 72.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.2e-92 342.8 248 70.6
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.9e-92 342.4 241 71.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 3.8e-92 342.0 237 71.3
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.4e-91 340.1 240 71.7
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 2.5e-91 339.3 240 70.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 4.2e-91 338.6 240 71.7
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.5e-91 338.2 244 70.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 7.2e-91 337.8 211 78.7
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-90 336.7 256 68.8
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.1e-90 336.3 252 68.3
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-90 336.3 252 68.3
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 2.7e-90 335.9 258 66.7
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.6e-90 335.5 237 72.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.6e-90 335.5 208 79.3
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 4.6e-90 335.1 237 72.2
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.9e-89 332.0 230 69.1
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 6.7e-89 331.3 248 68.5
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.1e-88 330.5 306 57.8
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.9e-88 329.7 212 78.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.9e-88 329.7 233 70.8
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.6e-87 326.6 208 78.4
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.2e-87 326.2 241 65.1
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.8e-87 325.1 312 57.4
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.4e-86 323.6 234 69.7
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.0e-85 319.7 246 65.4
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.0e-84 317.4 213 72.8
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.7e-84 316.6 230 68.7
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 2.9e-84 315.8 211 74.4
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.4e-83 313.5 208 75.0
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.6e-82 310.1 220 70.5
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.6e-80 302.8 201 73.6
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.2e-79 299.7 199 76.4
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 9.7e-72 274.2 198 67.2
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.7e-68 263.5 168 80.4
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 5.0e-68 261.9 307 50.5
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 8.5e-68 261.2 223 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 1.6e-61 240.4 239 51.9
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 6.5e-60 235.0 175 69.1
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.2e-59 232.3 238 49.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 5.7e-56 221.9 225 51.1
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.8e-55 219.5 138 73.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.8e-47 193.0 237 45.6
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.9e-47 192.2 137 67.9
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 8.3e-47 191.4 133 74.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 2.9e-44 183.0 160 61.9
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.9e-43 180.3 157 62.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 9.5e-43 177.9 157 61.8
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.5e-40 170.6 111 72.1
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 8.3e-39 164.9 175 53.7
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 3.5e-37 159.5 114 74.6
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 6.8e-33 145.2 123 63.4
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 8.9e-33 144.8 96 74.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 3.5e-29 132.9 95 67.4
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-28 131.3 94 69.1
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 9.9e-24 114.8 65 75.4
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.6e-20 101.7 115 51.3
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 2.4e-14 83.6 171 31.6
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 5.4e-14 82.4 47 76.6
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 4.3e-11 72.8 114 43.9
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 3.6e-10 69.7 114 43.0
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 7.1e-06 55.5 38 68.4


User provided reference genes

Program Settings