Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.8e-201 705.7 350 100.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.2e-184 649.8 349 90.5
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 2.7e-157 558.9 349 81.4
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 3.6e-157 558.5 349 79.9
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 5.2e-156 554.7 349 79.9
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.0e-155 552.7 350 79.4
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.6e-155 552.4 348 79.3
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.2e-154 549.3 352 79.3
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.7e-154 548.5 349 78.5
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.4e-153 545.8 350 76.9
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 3.1e-153 545.4 349 77.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.3e-153 544.7 348 79.0
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 2.0e-152 542.7 349 77.7
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 2.6e-152 542.3 349 77.9
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.6e-152 542.3 349 77.9
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 2.6e-152 542.3 349 77.4
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 3.5e-152 542.0 343 79.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.3e-151 540.0 349 77.4
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.2e-151 539.3 348 77.9
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 2.2e-151 539.3 352 77.6
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 5.0e-151 538.1 352 77.0
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 6.5e-151 537.7 348 78.4
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 3.2e-150 535.4 349 75.4
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 7.2e-150 534.3 349 76.8
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.6e-149 533.1 349 77.7
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 2.1e-149 532.7 349 77.4
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.0e-148 528.9 348 78.2
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 3.0e-148 528.9 348 78.2
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.0e-148 528.5 348 75.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.2e-147 526.9 348 76.7
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.0e-147 526.2 349 75.6
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.6e-147 525.8 355 74.6
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 3.3e-147 525.4 358 75.7
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 4.4e-147 525.0 350 76.6
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 4.4e-147 525.0 349 75.1
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 5.7e-147 524.6 354 74.0
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.3e-146 523.5 348 76.1
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.3e-146 523.5 349 75.6
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.8e-146 522.3 353 75.9
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 6.3e-146 521.2 354 73.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.4e-145 520.0 334 78.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.2e-144 516.9 335 77.9
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 3.5e-144 515.4 349 74.8
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 5.9e-144 514.6 359 74.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 5.9e-144 514.6 350 74.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.7e-144 514.2 357 72.8
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.2e-143 512.7 350 73.7
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.9e-143 512.3 349 74.8
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 3.8e-143 511.9 380 70.0
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 8.5e-143 510.8 353 72.8
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 8.5e-143 510.8 349 73.4
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 8.5e-143 510.8 351 73.2
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.9e-142 509.6 351 72.4
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 5.5e-142 508.1 349 73.4
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.1e-141 506.1 337 74.2
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 6.1e-141 504.6 363 71.6
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.0e-140 503.8 330 78.2
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.0e-140 503.8 352 71.0
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.0e-140 502.3 349 72.8
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 4.0e-140 501.9 344 73.8
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 6.8e-140 501.1 354 71.2
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 8.8e-140 500.7 337 74.2
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.5e-139 500.0 346 72.5
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.7e-139 498.0 355 71.3
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 7.5e-139 497.7 331 74.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 9.8e-139 497.3 349 71.9
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.1e-137 493.8 378 66.9
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.8e-137 493.0 353 70.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.4e-137 492.7 346 71.7
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.2e-136 490.3 333 72.4
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.6e-136 490.0 349 71.6
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.6e-136 490.0 329 75.4
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.0e-136 489.6 335 74.3
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 3.5e-136 488.8 308 80.5
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.7e-136 487.6 404 64.1
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.7e-135 486.5 342 72.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.7e-135 486.5 351 70.1
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 3.8e-135 485.3 335 71.0
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 6.5e-135 484.6 358 69.0
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.8e-133 479.2 349 69.9
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.6e-133 478.8 327 71.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 6.1e-133 478.0 331 72.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 5.2e-132 474.9 327 69.7
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 6.8e-132 474.6 349 68.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 2.6e-131 472.6 328 72.3
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 5.7e-131 471.5 334 69.5
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.7e-130 468.8 327 69.7
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.3e-130 468.0 333 72.1
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.4e-129 466.1 330 70.3
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.1e-129 465.3 334 69.5
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 1.6e-128 463.4 341 68.6
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.0e-128 463.0 374 65.2
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 3.5e-128 462.2 329 70.8
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 4.5e-128 461.8 339 69.0
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.5e-128 461.8 327 70.6
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 7.8e-128 461.1 327 70.6
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 328 69.5
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.3e-127 460.3 329 71.7
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 2.9e-127 459.1 341 68.0
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.9e-127 459.1 325 69.8
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 3.8e-127 458.8 335 69.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 3.8e-127 458.8 325 69.2
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.8e-127 458.8 335 68.1
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.5e-126 456.8 328 70.7
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.5e-126 456.8 327 70.0
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.5e-126 456.1 327 70.3
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 3.3e-126 455.7 339 68.4
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 7.3e-126 454.5 336 68.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 9.5e-126 454.1 336 68.8
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 9.5e-126 454.1 349 67.6
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.2e-125 453.8 348 67.5
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 3.6e-125 452.2 351 65.0
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.1e-125 451.4 336 69.9
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.2e-124 448.4 338 70.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 6.8e-124 448.0 330 66.4
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.0e-123 446.4 366 64.5
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 4.4e-123 445.3 348 67.2
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.7e-122 443.4 331 68.9
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.9e-122 441.8 316 69.6
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.9e-121 439.9 335 64.8
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.2e-121 439.1 327 68.2
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 4.6e-120 435.3 265 80.0
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.7e-119 433.3 307 69.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.9e-118 429.9 349 65.6
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.5e-118 429.5 282 79.1
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 5.6e-118 428.3 332 67.8
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 3.6e-117 425.6 333 64.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 7.0e-113 411.4 525 45.7
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.1e-112 409.8 228 87.7
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 3.5e-112 409.1 265 78.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.5e-110 402.9 286 73.4
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 3.0e-103 379.4 330 62.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.2e-99 367.5 346 54.6
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.7e-98 363.6 333 55.6
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 2.4e-89 333.2 280 62.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.2e-89 332.8 206 79.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-86 323.6 244 66.4
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.1e-85 320.1 290 55.9
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-84 317.8 226 71.7
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.1e-81 307.8 267 60.7
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 1.1e-81 307.8 203 75.4
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 3.5e-80 302.8 209 73.2
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.9e-74 282.3 189 75.1
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.8e-68 263.8 375 41.9
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 9.0e-68 261.5 162 79.0
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 5.7e-62 242.3 185 65.4
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.4e-57 227.6 165 70.3
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-57 227.6 212 58.5
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 4.2e-57 226.1 161 68.9
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 4.6e-56 222.6 188 64.4
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 4.1e-52 209.5 270 44.4
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 5.7e-46 189.1 329 40.7
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.3e-45 188.0 227 50.2
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 3.1e-44 183.3 145 65.5
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 2.0e-35 154.1 112 70.5
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 9.7e-30 135.2 383 32.4
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.8e-28 131.0 146 49.3
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.0e-26 122.9 302 33.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 9.4e-25 118.6 292 30.5
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 5.2e-23 112.8 71 77.5
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.4e-22 109.8 206 37.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-19 100.9 76 64.5
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.6e-18 95.9 57 77.2
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 8.6e-18 95.5 60 71.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.2e-17 93.2 60 80.0
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.3e-13 81.6 69 60.9
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 6.1e-08 62.8 63 50.8
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 6.8e-07 59.3 79 41.8
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 5.8e-06 56.2 57 56.1
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 9.8e-06 55.5 35 62.9


User provided reference genes

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