Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 1.0e-301 1039.6 682 100.0
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 1.7e-232 809.7 516 82.4
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 2.4e-218 762.7 640 75.2
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 1.2e-201 707.2 506 74.9
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 2.4e-194 682.9 541 71.0
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 5.3e-181 638.6 537 64.2
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 2.1e-177 626.7 536 62.3
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 3.5e-177 625.9 539 62.2
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 8.7e-176 621.3 545 62.0
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 2.8e-174 616.3 536 64.4
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 6.3e-174 615.1 481 68.4
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 1.5e-172 610.5 516 63.6
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 4.5e-172 609.0 508 65.6
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 5.5e-170 602.1 549 59.9
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 6.1e-169 598.6 460 67.8
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 1.0e-168 597.8 469 67.4
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 2.5e-167 593.2 494 64.0
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 7.4e-167 591.7 509 61.5
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 1.4e-165 587.4 407 72.5
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 2.4e-165 586.6 481 64.2
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 1.5e-164 583.9 509 60.5
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 4.5e-164 582.4 539 58.6
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 2.2e-163 580.1 496 61.5
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 2.9e-163 579.7 432 67.6
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 8.5e-163 578.2 492 63.4
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 1.4e-162 577.4 490 64.5
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 1.4e-162 577.4 543 60.0
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 1.9e-162 577.0 471 63.7
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 1.9e-162 577.0 527 61.1
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.9e-162 577.0 505 63.0
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 2.5e-162 576.6 490 64.3
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 2.5e-162 576.6 521 60.5
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 2.5e-162 576.6 499 62.3
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 4.2e-162 575.9 472 66.3
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 5.5e-162 575.5 503 61.6
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 1.6e-161 573.9 456 65.1
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 3.6e-161 572.8 535 61.1
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 4.7e-161 572.4 543 61.0
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 4.7e-161 572.4 508 60.6
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 6.1e-161 572.0 499 62.3
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 7.9e-161 571.6 497 62.0
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 1.0e-160 571.2 519 59.2
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 5.1e-160 568.9 541 59.3
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 8.8e-160 568.2 542 60.5
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 1.1e-159 567.8 520 60.8
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 3.3e-159 566.2 537 59.4
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 4.4e-159 565.8 457 66.1
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 7.4e-159 565.1 528 61.2
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 1.3e-158 564.3 524 59.2
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.3e-158 564.3 528 60.8
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 2.8e-158 563.1 495 62.0
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 2.8e-158 563.1 497 62.0
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 4.8e-158 562.4 542 58.3
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 4.8e-158 562.4 535 59.1
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 4.8e-158 562.4 535 58.9
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 1.1e-157 561.2 528 60.4
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 2.4e-157 560.1 513 60.8
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 4.1e-157 559.3 459 61.9
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.2e-156 557.8 510 61.6
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 2.0e-156 557.0 524 59.0
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 2.0e-156 557.0 454 62.6
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 7.7e-156 555.1 492 61.8
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 1.7e-155 553.9 497 60.0
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.2e-155 553.5 535 58.1
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 3.8e-155 552.7 530 60.2
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.9e-154 550.4 497 59.8
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.2e-153 547.7 407 67.8
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 2.1e-153 547.0 538 58.0
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.3e-152 543.5 471 61.6
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 2.3e-152 543.5 488 59.6
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 1.1e-151 541.2 516 58.7
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 1.5e-151 540.8 509 58.7
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 4.4e-151 539.3 484 59.1
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 7.4e-151 538.5 401 67.1
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 2.2e-150 537.0 502 58.6
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 6.3e-150 535.4 542 56.3
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 4.1e-149 532.7 510 59.4
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 9.1e-149 531.6 485 59.2
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.6e-148 530.8 432 63.7
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 1.7e-147 527.3 487 61.2
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 3.8e-147 526.2 493 59.0
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.9e-146 523.9 506 58.5
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 4.7e-145 519.2 532 56.6
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 5.2e-144 515.8 514 56.8
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 8.8e-144 515.0 403 65.8
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.2e-143 514.6 488 59.2
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 2.0e-143 513.8 483 58.4
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 2.4e-141 506.9 470 59.6
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 1.2e-140 504.6 388 64.4
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 1.0e-139 501.5 505 56.2
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 1.1e-138 498.0 538 54.1
TAR623G0538 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.5e-138 497.7 368 68.2
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 2.5e-138 496.9 406 62.3
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 1.2e-137 494.6 501 54.3
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 3.4e-135 486.5 400 66.0
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 8.3e-134 481.9 511 52.8
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 2.4e-133 480.3 402 60.2
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 2.0e-132 477.2 398 62.8
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 5.9e-132 475.7 480 56.9
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 5.9e-132 475.7 385 61.3
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 1.3e-131 474.6 407 59.7
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 5.5e-130 469.2 486 55.8
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 3.6e-129 466.5 518 52.3
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 1.2e-127 461.5 429 55.9
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 2.6e-127 460.3 412 58.5
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.8e-125 454.1 486 55.3
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 5.0e-123 446.0 412 56.8
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 1.9e-122 444.1 502 51.6
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 3.1e-120 436.8 343 64.1
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 3.1e-120 436.8 394 57.6
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 6.6e-107 392.5 405 52.8
Actinidia21716 Actinidia chinensis HOM05D005013 ORTHO05D006005 8.9e-104 382.1 286 68.2
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 7.6e-103 379.0 328 59.1
Mapoly0123s0029 Marchantia polymorpha HOM05D005013 ORTHO05D006005 3.5e-100 370.2 430 47.0
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 1.0e-99 368.6 328 63.4
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 1.2e-97 361.7 413 48.2
SMO116G0383 Selaginella moellendorffii HOM05D005013 ORTHO05D006005 1.5e-95 354.8 363 52.6
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 9.9e-95 352.1 421 47.5
BcaNung02135 Brassica carinata HOM05D005013 ORTHO05D006005 2.9e-94 350.5 346 54.9
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.3e-86 325.1 361 51.5
SHI11095 Sapria himalayana HOM05D005013 ORTHO05D006005 1.4e-80 305.1 475 41.9
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 2.7e-76 290.8 318 56.0
AL2G41840 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 4.6e-76 290.0 218 66.1
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 1.8e-64 251.5 497 37.0
Cpa.g.sc109.1 Carica papaya HOM05D005013 ORTHO05D006005 4.5e-63 246.9 277 54.5
Cpa.g.sc109.3 Carica papaya HOM05D005013 ORTHO05D006005 8.4e-62 242.7 184 65.8
CBR_g8033 Chara braunii HOM05D005013 ORTHO05D006005 2.7e-60 237.7 354 39.5
BraA10t45345Z Brassica rapa HOM05D005013 ORTHO05D006005 4.1e-56 223.8 181 63.0
CDE06G0689 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 5.3e-56 223.4 361 41.3
Lj5C53T3 Lonicera japonica HOM05D005013 ORTHO05D006005 3.1e-48 197.6 193 53.9
HPP92_015185 Vanilla planifolia HOM05D005013 ORTHO05D006005 3.1e-48 197.6 179 56.4
Oeu023599.1 Olea europaea HOM05D005013 ORTHO05D006005 2.2e-46 191.4 132 67.4
Migut.I00890 Erythranthe guttata HOM05D005013 ORTHO05D006005 7.4e-42 176.4 518 28.4
Lsat_1_v5_gn_6_46660 Lactuca sativa HOM05D005013 ORTHO05D006005 3.6e-36 157.5 94 84.0
CARHR074670 Cardamine hirsuta HOM05D005013 ORTHO05D006005 4.1e-32 144.1 179 48.0
Psat4g155920 Pisum sativum HOM05D001854 ORTHO05D001800 8.3e-25 119.8 95 60.0
Psat4g155880 Pisum sativum HOM05D001854 ORTHO05D001800 1.8e-24 118.6 95 60.0
Oeu023601.1 Olea europaea HOM05D005013 ORTHO05D006005 4.5e-23 114.0 142 48.6
Lsat_1_v5_gn_1_14160 Lactuca sativa HOM05D005013 ORTHO05D006005 2.7e-20 104.8 118 55.1
Cre12.g520250 Chlamydomonas reinhardtii HOM05D005013 ORTHO05D006005 5.2e-19 100.5 232 33.2
CAN.G907.1 Capsicum annuum HOM05D005013 ORTHO05D006005 1.2e-18 99.4 88 56.8
TAR560G0009 Trochodendron aralioides HOM05D005013 ORTHO05D006005 2.0e-18 98.6 147 51.7
Oeu026780.1 Olea europaea HOM05D005013 ORTHO05D006005 8.3e-17 93.2 142 49.3
Nn2g13410 Nelumbo nucifera HOM05D005013 ORTHO05D006005 4.5e-15 87.4 85 51.8
vmacro04324 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 3.6e-12 77.8 129 41.9
AL2G25330 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 2.3e-11 75.1 139 36.0
CAN.G1143.9 Capsicum annuum HOM05D000602 ORTHO05D001147 2.3e-11 75.1 86 51.2
Lsat_1_v5_gn_5_133740 Lactuca sativa HOM05D000912 ORTHO05D021086 5.7e-10 70.5 74 59.5
CAN.G1143.11 Capsicum annuum HOM05D005013 ORTHO05D115532 1.7e-09 68.9 44 72.7
CBR_g48652 Chara braunii HOM05D005013 ORTHO05D006005 2.4e-08 65.1 165 33.9
SEGI_39677 Sequoiadendron giganteum HOM05D050634 ORTHO05D006005 2.4e-08 65.1 118 33.1


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