Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 7.5e-144 513.8 261 100.0
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 1.4e-102 376.7 277 71.5
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 5.8e-96 354.8 263 69.2
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.7e-85 319.3 274 59.1
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 5.1e-84 315.1 274 60.2
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.4e-81 307.0 274 57.3
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.7e-79 300.1 274 56.2
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.0e-76 290.8 266 58.3
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 4.8e-74 282.0 278 54.7
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 8.2e-74 281.2 277 54.2
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.4e-73 279.6 267 55.8
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 5.3e-73 278.5 276 52.5
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 6.9e-73 278.1 278 52.9
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.2e-72 277.3 266 55.6
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.0e-72 276.6 274 53.3
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.1e-70 270.8 275 53.1
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 3.6e-69 265.8 258 56.6
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 4.7e-69 265.4 272 51.1
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.9e-69 264.6 273 51.6
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.4e-68 263.8 278 52.9
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.4e-68 263.8 275 51.6
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 3.9e-68 262.3 261 54.4
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.1e-67 260.8 271 52.8
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 9.7e-67 257.7 275 53.5
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 8.2e-66 254.6 273 51.6
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.1e-65 254.2 266 51.5
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.8e-65 253.4 271 49.1
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 4.1e-65 252.3 256 50.8
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 7.7e-64 248.1 279 47.7
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.3e-63 247.3 227 57.3
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.3e-63 247.3 270 48.9
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 3.8e-63 245.7 275 48.7
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 8.5e-63 244.6 258 51.6
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.1e-62 244.2 272 46.3
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.5e-62 243.8 277 46.6
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.5e-62 243.8 259 52.5
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 3.2e-62 242.7 257 51.0
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 5.5e-62 241.9 232 53.9
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.6e-61 240.4 264 47.7
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 2.7e-61 239.6 304 45.4
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 4.7e-61 238.8 266 47.7
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 6.1e-61 238.4 272 48.2
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.8e-60 236.9 278 48.6
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.0e-60 235.7 264 46.6
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.5e-59 233.8 259 52.9
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 2.0e-59 233.4 264 46.2
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 3.3e-59 232.6 225 53.8
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.4e-59 232.3 264 46.2
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 5.7e-59 231.9 264 47.0
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 7.5e-59 231.5 264 47.0
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.3e-58 230.7 268 45.1
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.7e-58 230.3 255 48.2
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 2.2e-58 229.9 264 47.3
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 2.2e-58 229.9 268 46.3
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.3e-58 228.4 262 46.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 8.2e-58 228.0 262 47.7
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.1e-57 227.6 239 47.7
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.4e-57 227.3 271 45.4
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.8e-57 226.9 269 46.1
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.6e-56 223.8 278 44.6
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 1.6e-56 223.8 273 43.2
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 3.5e-56 222.6 275 45.8
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 1.3e-55 220.7 273 44.0
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.9e-55 219.5 275 46.5
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.0e-55 218.8 230 49.6
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 5.0e-55 218.8 216 52.3
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.5e-54 217.2 271 45.4
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.9e-54 216.9 250 47.6
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 2.5e-54 216.5 190 60.5
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 2.5e-54 216.5 222 52.7
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 5.5e-54 215.3 271 44.6
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 7.2e-54 214.9 268 45.1
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 7.2e-54 214.9 287 42.9
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 7.2e-54 214.9 208 53.8
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 3.6e-53 212.6 258 46.5
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 8.0e-53 211.5 260 44.2
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 5.2e-52 208.8 267 42.7
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 3.4e-51 206.1 219 48.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.4e-51 205.7 225 48.0
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 9.8e-51 204.5 263 44.5
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.7e-50 202.6 225 47.6
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.4e-49 198.7 252 44.0
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 7.0e-49 198.4 277 44.0
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 2.0e-48 196.8 190 52.6
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 3.5e-48 196.1 275 40.7
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 2.2e-47 193.4 268 40.7
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 2.3e-44 183.3 274 39.1
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 4.0e-44 182.6 215 47.9
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 2.6e-43 179.9 253 44.3
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 4.4e-43 179.1 226 43.4
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.7e-43 178.7 181 50.8
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 3.7e-42 176.0 224 45.1
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 8.9e-36 154.8 140 59.3
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.8e-29 133.3 199 38.7
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 6.2e-29 132.1 175 39.4
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 2.1e-16 90.5 100 47.0
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 6.6e-15 85.5 85 52.9
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 2.2e-10 70.5 43 67.4
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.2e-10 70.5 272 29.8
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 2.9e-10 70.1 57 63.2


User provided reference genes

Program Settings