Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.6e-76 289.3 136 100.0
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 5.6e-66 254.2 136 83.1
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 9.9e-63 243.4 137 83.9
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 3.6e-57 224.9 140 70.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 4.7e-57 224.6 143 67.8
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.1e-56 223.4 142 71.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.1e-56 223.4 142 71.1
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.5e-55 219.5 144 66.7
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 4.4e-55 218.0 136 69.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 4.4e-55 218.0 139 71.9
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 5.8e-55 217.6 140 72.1
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 5.8e-55 217.6 140 72.1
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 5.8e-55 217.6 140 72.1
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.3e-54 216.5 144 68.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.7e-54 216.1 107 82.2
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.9e-54 215.3 140 69.3
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 3.8e-54 214.9 143 69.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.9e-54 214.5 142 66.9
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.4e-54 213.8 142 66.2
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.4e-53 213.0 136 68.4
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.9e-53 212.6 136 71.3
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.4e-53 212.2 137 70.8
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 3.2e-53 211.8 139 69.8
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 5.4e-53 211.1 145 66.9
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 5.4e-53 211.1 138 71.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 5.4e-53 211.1 137 67.9
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.2e-52 209.9 136 68.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.6e-52 209.5 136 66.9
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.1e-52 209.1 133 68.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 2.1e-52 209.1 145 66.2
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.7e-52 208.8 137 69.3
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.7e-52 208.8 137 69.3
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.7e-52 208.8 137 69.3
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.7e-52 208.8 137 69.3
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.7e-52 208.8 137 69.3
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 4.6e-52 208.0 136 69.1
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 6.0e-52 207.6 136 68.4
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.0e-51 206.8 139 66.9
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.7e-51 206.1 144 64.6
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.3e-51 205.7 136 66.9
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 3.9e-51 204.9 136 66.2
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 3.9e-51 204.9 137 68.6
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 3.9e-51 204.9 106 78.3
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 3.9e-51 204.9 136 66.9
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.9e-51 204.9 107 76.6
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 6.6e-51 204.1 136 66.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 6.6e-51 204.1 136 65.4
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-50 203.4 142 67.6
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 64.1
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.5e-50 203.0 136 66.2
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.5e-50 203.0 108 76.9
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.5e-50 203.0 138 65.2
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.5e-50 203.0 138 65.2
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.9e-50 202.6 136 64.7
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 3.3e-50 201.8 105 77.1
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.3e-50 201.4 138 65.9
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.3e-50 201.4 138 65.9
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 5.6e-50 201.1 141 66.0
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 5.6e-50 201.1 144 65.3
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 5.6e-50 201.1 139 66.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 5.6e-50 201.1 139 69.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.3e-49 199.9 137 68.6
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.3e-49 199.9 132 67.4
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.8e-49 198.7 136 65.4
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.8e-49 198.7 142 62.0
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 6.2e-49 197.6 140 68.6
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 8.1e-49 197.2 138 65.2
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.1e-48 196.8 146 60.3
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.8e-48 196.1 132 65.2
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.8e-48 196.1 136 62.5
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 3.1e-48 195.3 137 64.2
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.1e-48 195.3 144 61.8
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.5e-47 193.0 157 59.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.6e-47 192.2 136 64.0
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.6e-47 192.2 103 79.6
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 2.6e-47 192.2 115 72.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 2.6e-47 192.2 142 61.3
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.4e-47 191.8 139 64.7
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 4.5e-47 191.4 142 61.3
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.5e-47 191.4 106 73.6
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 9.9e-47 190.3 132 62.9
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 6.4e-46 187.6 182 49.5
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.1e-45 186.8 175 53.7
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.1e-45 186.8 140 62.1
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 1.4e-45 186.4 142 59.9
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.4e-45 185.7 148 58.1
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 3.2e-45 185.3 91 83.5
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 5.4e-45 184.5 151 56.3
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 7.1e-45 184.1 125 62.4
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 6.0e-44 181.0 125 61.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 6.0e-44 181.0 140 55.0
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.1e-42 176.8 137 61.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.9e-42 176.0 173 51.4
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 6.9e-40 167.5 99 66.7
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.0e-40 167.2 106 67.0
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.6e-39 165.6 130 51.5
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.6e-39 165.6 140 56.4
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 7.6e-39 164.1 106 67.9
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.7e-38 162.9 123 61.8
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.9e-38 162.2 116 68.1
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 5.5e-37 157.9 78 83.3
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.1e-34 150.2 124 55.6
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 3.3e-34 148.7 149 50.3
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 4.3e-34 148.3 78 75.6
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 7.4e-34 147.5 110 60.0
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 4.8e-33 144.8 82 74.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 6.2e-33 144.4 90 71.1
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.6e-28 129.8 95 65.3
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.5e-28 128.6 95 64.2
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 5.1e-27 124.8 99 62.6
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 2.5e-26 122.5 101 58.4
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 2.4e-24 115.9 88 63.6
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.1e-24 115.5 101 57.4
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.1e-24 115.5 101 57.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.0e-22 110.5 98 55.1
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 2.2e-22 109.4 93 47.3
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 5.0e-22 108.2 100 56.0
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.3e-17 93.6 56 66.1
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 6.3e-17 91.3 96 49.0
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 4.7e-12 75.1 62 54.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 7.4e-10 67.8 35 77.1
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.8e-09 65.9 64 56.2
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 9.1e-08 60.8 30 76.7
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.3e-06 57.0 61 47.5


User provided reference genes

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