Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 0.0e+00 1286.2 661 100.0
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 0.0e+00 1093.2 660 84.2
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 9.4e-292 1006.5 670 79.7
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 2.0e-270 935.6 664 72.3
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 2.7e-267 925.2 663 72.1
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 5.2e-266 921.0 668 71.1
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 9.1e-263 910.2 655 71.1
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 2.1e-259 899.0 663 70.4
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 8.0e-259 897.1 661 70.7
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 1.8e-258 896.0 663 70.6
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 2.3e-258 895.6 648 71.9
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 3.0e-258 895.2 650 71.7
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 6.8e-258 894.0 663 70.1
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 8.8e-258 893.6 662 70.2
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.5e-257 892.9 662 70.1
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 3.4e-257 891.7 660 69.8
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 4.4e-257 891.3 653 70.3
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 7.5e-257 890.6 663 68.9
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 9.8e-257 890.2 661 69.0
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 2.2e-256 889.0 660 69.2
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 2.2e-256 889.0 667 70.2
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 8.3e-256 887.1 665 70.7
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 2.4e-255 885.6 665 69.3
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 3.1e-255 885.2 658 69.8
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 7.0e-255 884.0 670 69.7
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 9.1e-255 883.6 659 68.7
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 9.1e-255 883.6 660 70.0
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 9.1e-255 883.6 658 70.5
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.1e-255 883.6 666 69.4
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 4.5e-254 881.3 659 68.9
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 5.9e-254 880.9 662 68.7
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.0e-253 880.2 661 68.2
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 1.3e-253 879.8 663 70.4
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.9e-253 878.6 662 68.7
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.9e-253 878.6 667 69.3
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 5.0e-253 877.9 659 68.6
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 6.6e-253 877.5 661 69.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 8.6e-253 877.1 663 70.0
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 8.6e-253 877.1 659 69.0
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 8.6e-253 877.1 661 68.7
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 7.2e-252 874.0 650 69.5
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.1e-251 872.5 648 70.8
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 8.0e-251 870.5 664 69.3
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 4.0e-250 868.2 667 68.7
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 8.9e-250 867.1 663 69.1
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 2.0e-249 865.9 661 68.4
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 5.7e-249 864.4 653 68.5
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 6.3e-248 860.9 648 68.7
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 8.3e-248 860.5 661 67.8
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 1.1e-247 860.1 664 68.1
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 7.0e-247 857.4 661 67.3
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 2.0e-246 855.9 683 66.3
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 2.0e-246 855.9 659 67.4
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 1.0e-245 853.6 661 67.6
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.3e-245 853.2 647 67.5
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 2.9e-245 852.0 647 67.7
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 3.9e-245 851.7 659 67.5
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 1.1e-244 850.1 661 67.0
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 1.6e-243 846.3 661 66.7
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 4.0e-242 841.6 661 67.0
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 8.9e-242 840.5 647 68.3
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 2.9e-240 835.5 700 64.9
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 6.4e-240 834.3 700 64.7
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 6.4e-240 834.3 659 65.4
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 3.2e-239 832.0 646 68.0
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 2.3e-237 825.9 649 66.6
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 6.6e-237 824.3 654 66.2
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 1.2e-233 813.5 654 65.4
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 9.8e-233 810.4 610 68.5
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 2.2e-232 809.3 670 62.5
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 3.7e-232 808.5 648 66.7
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 4.1e-231 805.1 662 65.6
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.0e-229 800.4 692 63.0
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 1.0e-229 800.4 606 68.3
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 5.1e-229 798.1 665 63.8
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 4.3e-228 795.0 753 58.8
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 2.8e-227 792.3 655 64.0
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 6.2e-227 791.2 666 63.2
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 3.1e-226 788.9 589 70.1
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 1.1e-218 763.8 620 65.3
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 4.0e-218 761.9 596 67.1
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 1.2e-217 760.4 873 51.4
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.2e-216 756.1 669 61.9
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 2.7e-214 749.2 591 66.5
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 5.8e-209 731.5 656 59.6
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 3.8e-208 728.8 686 57.0
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 3.9e-205 718.8 689 58.3
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 2.5e-204 716.1 646 61.1
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 8.7e-197 691.0 646 57.7
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 1.6e-187 660.2 851 47.4
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.9e-183 646.7 674 53.1
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.2e-182 644.0 563 60.9
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.8e-181 640.2 481 69.2
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 7.9e-174 614.8 514 62.8
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 1.4e-173 614.0 480 66.9
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 8.5e-168 594.7 583 55.6
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 7.5e-156 555.1 496 60.9
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.2e-153 547.7 607 52.1
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 6.1e-142 508.8 436 61.5
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 3.5e-129 466.5 435 58.6
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 1.7e-112 411.0 475 47.8
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 2.3e-104 384.0 345 59.1
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 3.3e-79 300.4 444 41.4
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 1.8e-77 294.7 232 62.1
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 4.0e-77 293.5 319 50.8
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 6.7e-72 276.2 207 70.0
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 8.2e-70 269.2 203 68.5
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.6e-65 255.0 170 73.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 3.3e-63 247.3 385 40.5
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.7e-59 235.0 179 65.9
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 6.5e-59 233.0 249 54.6
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 6.1e-57 226.5 283 48.1
Nn1g00103 Nelumbo nucifera HOM05D001598 ORTHO05D007192 5.0e-43 180.3 141 64.5
Zm00001eb067470 Zea mays HOM05D001598 ORTHO05D007192 4.8e-38 163.7 167 55.7
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 7.7e-36 156.4 445 30.1
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 7.7e-36 156.4 144 55.6
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 1.0e-35 156.0 138 58.7
HanXRQChr07g0205981 Helianthus annuus HOM05D001598 ORTHO05D007192 1.0e-32 146.0 98 76.5
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 2.2e-30 138.3 90 72.2
QL01p007301 Quercus lobata HOM05D001598 ORTHO05D007192 2.2e-30 138.3 101 69.3
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.4e-29 135.6 96 69.8
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 5.4e-29 133.7 88 72.7
Lj2C893T10 Lonicera japonica HOM05D001598 ORTHO05D007192 2.9e-27 127.9 79 78.5
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 1.2e-25 122.5 153 46.4
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 8.0e-25 119.8 85 72.9
SHI25334 Sapria himalayana HOM05D001598 ORTHO05D000001 3.0e-24 117.9 94 61.7
Mapoly0056s0125 Marchantia polymorpha HOM05D001598 ORTHO05D007192 2.0e-23 115.2 101 57.4
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 9.8e-23 112.8 164 43.3
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 2.8e-22 111.3 92 67.4
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 2.9e-19 101.3 92 62.0
Cre06.g282150 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 5.0e-19 100.5 165 37.6
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 6.6e-19 100.1 84 61.9
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.5e-18 99.0 96 59.4
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.6e-17 95.5 73 68.5
Glyma.14G045450 Glycine max HOM05D001598 ORTHO05D007192 1.0e-16 92.8 65 67.7
Sc01g0005570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 3.4e-15 87.8 67 62.7
Os04g0661600 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D007192 2.2e-14 85.1 61 72.1
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-12 79.0 61 60.7
Gohir.D02G147550 Gossypium hirsutum HOM05D006828 ORTHO05D008312 7.8e-12 76.6 50 74.0
Gorai.013G167300 Gossypium raimondii HOM05D006828 ORTHO05D008312 7.8e-12 76.6 50 74.0
Gohir.D05G085901 Gossypium hirsutum HOM05D001598 ORTHO05D008312 9.5e-10 69.7 50 68.0
TPR.G22712 Trifolium pratense HOM05D001598 ORTHO05D046738 6.8e-08 63.5 89 44.9
TWI56G1164 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 3.7e-06 57.8 49 57.1


User provided reference genes

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