Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.6e-175 619.4 315 100.0
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 3.6e-146 521.9 312 83.7
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 9.4e-139 497.3 315 81.9
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.5e-123 446.0 264 83.7
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 6.1e-122 441.4 301 74.4
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 4.4e-120 435.3 265 81.1
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 7.5e-120 434.5 306 73.2
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 9.8e-120 434.1 306 72.2
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.3e-119 433.7 265 80.8
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.7e-119 432.2 313 72.8
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 3.7e-119 432.2 264 81.1
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 2.4e-118 429.5 310 71.3
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.4e-118 429.5 310 72.6
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 2.4e-118 429.5 307 72.6
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 4.1e-118 428.7 265 80.0
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 7.0e-118 427.9 310 71.6
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 9.2e-118 427.6 257 82.5
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.7e-117 426.0 313 69.6
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.5e-117 425.6 308 71.4
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 1.0e-116 424.1 247 81.8
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 1.0e-116 424.1 306 72.5
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.0e-116 424.1 298 74.2
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 1.3e-116 423.7 264 77.3
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.3e-116 422.9 306 72.2
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.0e-116 421.8 309 70.2
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 6.6e-116 421.4 262 79.8
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 8.6e-116 421.0 309 71.2
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.5e-115 419.5 306 71.9
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 2.5e-115 419.5 304 69.4
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 4.3e-115 418.7 258 80.6
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 7.3e-115 417.9 316 69.3
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 1.2e-114 417.2 308 69.2
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 1.2e-114 417.2 266 77.1
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.8e-114 416.0 308 69.8
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 3.6e-114 415.6 314 71.7
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 3.6e-114 415.6 311 70.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 1.8e-113 413.3 262 78.6
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 5.2e-113 411.8 263 75.3
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 8.9e-113 411.0 269 75.5
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 1.2e-112 410.6 312 69.2
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 2.0e-112 409.8 256 79.7
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.0e-112 409.8 272 76.5
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 2.6e-112 409.5 313 68.1
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 2.6e-112 409.5 295 70.8
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 3.4e-112 409.1 299 70.2
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 4.4e-112 408.7 262 77.5
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 7.5e-112 407.9 323 68.1
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 7.5e-112 407.9 269 77.0
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 9.8e-112 407.5 260 78.1
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.2e-111 406.4 285 71.6
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 4.9e-111 405.2 266 75.6
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 1.9e-110 403.3 256 77.7
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 4.1e-110 402.1 276 73.6
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 7.0e-110 401.4 291 70.1
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 7.0e-110 401.4 255 78.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 2.0e-109 399.8 261 76.2
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.0e-109 399.8 293 68.9
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.7e-109 399.4 260 76.2
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.5e-109 399.1 276 72.8
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 1.7e-108 396.7 285 71.6
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.3e-108 396.4 244 77.5
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.0e-108 396.0 262 74.4
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.9e-107 393.3 295 69.2
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.5e-107 392.9 241 79.7
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 3.3e-107 392.5 263 74.9
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 3.3e-107 392.5 278 71.6
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.6e-106 390.2 257 73.5
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 4.7e-106 388.7 262 73.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.5e-104 383.6 242 78.9
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 5.4e-102 375.2 238 80.3
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 1.6e-101 373.6 328 64.0
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 1.6e-98 363.6 276 66.7
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.1e-98 363.2 260 71.2
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 8.1e-98 361.3 278 68.3
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.3e-97 359.8 266 70.3
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 8.9e-97 357.8 260 70.4
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 4.4e-96 355.5 293 64.8
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.4e-96 355.5 266 68.4
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 5.8e-96 355.1 217 81.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 2.2e-95 353.2 241 71.0
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 2.9e-95 352.8 260 70.0
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 3.8e-95 352.4 244 72.1
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 3.8e-95 352.4 244 72.1
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 3.8e-95 352.4 247 71.3
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 6.4e-95 351.7 265 69.1
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-94 350.9 242 72.3
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.1e-94 350.9 246 72.0
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.4e-94 350.5 244 72.5
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.4e-94 350.5 244 72.5
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.4e-94 348.6 267 69.7
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.6e-93 347.1 266 68.8
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.1e-93 346.7 260 68.1
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 2.7e-93 346.3 266 68.8
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.3e-92 344.0 260 68.5
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 8.6e-92 341.3 337 58.2
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.9e-91 340.1 251 71.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.5e-91 339.7 217 79.7
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 7.3e-91 338.2 250 68.8
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.6e-90 337.0 216 78.2
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 2.1e-90 336.7 305 61.3
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 3.6e-90 335.9 252 71.4
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 1.5e-88 330.5 203 82.8
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.2e-86 322.8 254 64.6
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 2.3e-84 316.6 244 66.8
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.6e-82 309.3 245 63.7
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 6.9e-81 305.1 179 86.6
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 5.8e-80 302.0 180 84.4
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.1e-75 287.7 218 68.3
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 3.1e-73 279.6 245 60.4
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.3e-73 278.9 265 60.8
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 9.9e-72 274.6 240 59.6
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.1e-67 261.2 252 59.1
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 2.9e-55 219.9 164 72.0
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 7.2e-54 215.3 289 45.0
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.6e-45 187.6 119 75.6
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 6.5e-39 165.6 119 63.9
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 4.7e-37 159.5 112 69.6
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.5e-35 154.5 89 77.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 4.8e-34 149.4 95 73.7
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.1e-29 132.5 85 75.3
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.4e-25 120.6 133 50.4
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 7.5e-11 72.4 44 75.0
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 2.8e-10 70.5 64 59.4
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 5.9e-08 62.8 46 65.2


User provided reference genes

Program Settings