Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.4e-256 889.0 438 100.0
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.8e-198 696.0 440 76.4
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 4.0e-182 641.7 437 73.2
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 1.4e-179 633.3 445 69.9
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 4.6e-178 628.2 451 68.5
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 1.5e-176 623.2 462 66.0
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 9.6e-176 620.5 451 67.2
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 6.2e-175 617.8 445 65.8
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 5.3e-174 614.8 436 68.3
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 2.0e-173 612.8 449 66.1
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 2.0e-173 612.8 446 68.4
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 4.4e-173 611.7 450 67.1
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 4.9e-172 608.2 449 66.1
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.9e-171 606.3 439 65.8
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.2e-170 603.6 439 65.6
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.3e-169 600.1 439 65.1
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 3.9e-169 598.6 439 65.4
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 6.6e-169 597.8 450 64.9
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 6.6e-169 597.8 452 65.0
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.1e-168 597.0 440 67.3
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 1.5e-168 596.7 478 61.9
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 2.5e-168 595.9 450 66.0
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 1.3e-167 593.6 438 66.4
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 3.6e-167 592.0 451 65.6
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 1.1e-166 590.5 451 65.0
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.1e-166 590.5 440 66.8
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 1.1e-166 590.5 450 66.7
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 1.4e-166 590.1 464 62.7
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.4e-166 590.1 440 65.2
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 2.4e-166 589.3 438 64.6
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 9.0e-166 587.4 448 66.3
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 2.0e-165 586.3 444 64.2
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 2.0e-165 586.3 448 65.6
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 2.0e-165 586.3 440 65.0
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 7.6e-165 584.3 457 62.6
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 9.9e-165 583.9 435 65.5
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 9.9e-165 583.9 453 64.2
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 3.8e-164 582.0 440 64.3
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.2e-162 577.0 491 60.1
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 2.3e-161 572.8 449 62.6
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 3.9e-161 572.0 449 62.4
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 5.1e-161 571.6 445 62.7
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 8.7e-161 570.9 447 63.3
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 2.5e-160 569.3 449 61.9
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 2.5e-160 569.3 449 61.9
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 2.5e-160 569.3 456 62.1
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 5.6e-160 568.2 447 64.0
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.6e-160 568.2 449 63.0
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 5.6e-160 568.2 496 58.7
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 9.6e-160 567.4 470 61.3
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 9.6e-160 567.4 448 62.7
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.3e-159 567.0 447 63.8
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 1.3e-159 567.0 445 62.9
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 2.1e-159 566.2 443 62.5
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 4.8e-159 565.1 447 63.5
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 4.8e-159 565.1 447 63.8
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 4.8e-159 565.1 447 63.8
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 3.1e-158 562.4 462 60.2
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.2e-157 560.5 455 59.8
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 1.3e-156 557.0 428 65.2
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.7e-156 556.6 418 63.6
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 6.4e-156 554.7 448 61.8
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 5.5e-155 551.6 451 58.3
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.5e-152 542.7 487 57.7
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 6.2e-151 538.1 445 57.5
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.5e-149 533.5 445 56.6
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 3.4e-149 532.3 525 54.1
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.5e-149 531.9 542 52.6
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.1e-147 527.3 521 52.6
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.5e-147 526.2 431 61.5
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.1e-147 524.6 459 59.5
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 3.7e-143 512.3 369 66.7
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 3.8e-140 502.3 463 53.3
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 9.4e-139 497.7 425 59.1
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 7.9e-138 494.6 399 64.4
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 7.9e-138 494.6 485 54.8
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 6.5e-132 474.9 443 55.3
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 2.5e-131 473.0 334 68.0
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 4.2e-131 472.2 401 60.1
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 3.6e-130 469.2 468 53.2
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.7e-124 450.3 456 53.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.0e-120 436.8 399 57.6
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 6.5e-116 421.8 353 62.0
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 2.8e-111 406.4 488 43.9
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.8e-105 387.1 451 49.4
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.8e-103 379.8 450 42.2
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.7e-103 379.4 450 42.2
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 9.1e-102 374.8 458 41.5
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 3.8e-100 369.4 324 57.4
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 1.9e-99 367.1 389 52.7
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 2.8e-95 353.2 212 76.9
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 3.9e-92 342.8 213 75.1
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 9.5e-91 338.2 244 66.0
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.3e-89 333.6 271 59.8
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 4.4e-88 329.3 199 77.9
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 9.8e-88 328.2 401 47.9
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-86 324.7 261 61.3
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.2e-86 323.2 199 74.9
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 3.0e-84 316.6 200 72.0
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 8.1e-82 308.5 186 76.3
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.8e-73 278.9 228 54.4
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.6e-69 267.7 167 71.3
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.5e-67 261.2 151 80.1
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 1.5e-67 261.2 221 57.9
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.7e-66 256.1 228 56.1
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 4.7e-66 256.1 261 51.0
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 8.1e-66 255.4 201 61.7
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 1.7e-60 237.7 234 52.1
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 7.3e-59 232.3 245 50.6
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 4.9e-55 219.5 136 73.5
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 8.4e-55 218.8 202 54.0
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 6.0e-53 212.6 336 35.7
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.6e-50 204.5 234 46.2
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 6.2e-50 202.6 207 50.7
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 5.3e-49 199.5 181 51.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 2.1e-42 177.6 163 51.5
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.3e-39 168.3 188 47.9
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 3.2e-38 163.7 261 40.2
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 3.0e-36 157.1 97 76.3
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.5e-35 154.8 274 32.5
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.4e-33 147.5 86 72.1
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 7.9e-29 132.5 399 27.8
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.9e-28 130.2 87 67.8
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 5.1e-28 129.8 244 36.1
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.5e-24 118.2 88 60.2
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 1.1e-17 95.5 50 86.0
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 2.9e-15 87.4 58 70.7
Cre10.g466300 Chlamydomonas reinhardtii HOM05D006173 ORTHO05D007685 6.1e-13 79.7 345 27.0
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.0e-12 79.0 55 61.8


User provided reference genes

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