Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.4e-92 341.7 173 100.0
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 7.2e-42 174.5 174 51.1
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 9.4e-42 174.1 174 51.1
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 8.8e-40 167.5 173 49.7
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 9.7e-39 164.1 173 48.6
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 2.8e-38 162.5 171 48.0
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 1.4e-37 160.2 167 46.7
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 1.8e-37 159.8 173 46.8
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.8e-37 159.8 169 46.2
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 1.8e-37 159.8 162 51.2
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.4e-37 159.5 170 50.6
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 4.1e-37 158.7 169 47.3
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 1.2e-36 157.1 162 49.4
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 1.2e-36 157.1 162 49.4
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 1.5e-36 156.8 170 45.9
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.6e-36 156.0 162 50.0
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 2.6e-36 156.0 162 48.1
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.4e-36 155.6 163 48.5
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 4.5e-36 155.2 169 47.3
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 5.9e-36 154.8 162 48.8
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 5.9e-36 154.8 161 49.7
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 5.9e-36 154.8 161 47.2
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 5.9e-36 154.8 168 45.2
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 7.7e-36 154.5 169 46.2
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 1.0e-35 154.1 162 46.3
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.3e-35 153.7 156 50.0
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 1.7e-35 153.3 163 48.5
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.2e-35 152.9 173 46.8
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.2e-35 152.9 173 46.8
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 2.9e-35 152.5 174 47.1
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 2.9e-35 152.5 174 46.6
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.8e-35 152.1 174 46.0
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 5.0e-35 151.8 173 46.2
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 5.0e-35 151.8 173 46.2
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 5.0e-35 151.8 173 46.2
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 5.0e-35 151.8 160 48.1
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 6.5e-35 151.4 169 46.2
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 1.1e-34 150.6 161 47.8
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.1e-34 150.6 171 45.6
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.4e-34 150.2 162 48.1
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.4e-34 150.2 169 45.0
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.4e-34 150.2 169 45.0
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 1.9e-34 149.8 157 49.0
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.5e-34 149.4 172 44.2
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 2.5e-34 149.4 168 45.2
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 3.2e-34 149.1 169 46.7
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 3.2e-34 149.1 162 45.1
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 4.2e-34 148.7 169 47.3
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 4.2e-34 148.7 172 44.2
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 5.5e-34 148.3 185 44.3
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 7.2e-34 147.9 163 47.9
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 7.2e-34 147.9 161 46.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.6e-33 146.7 169 45.6
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 2.1e-33 146.4 169 45.6
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 2.1e-33 146.4 171 42.1
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 2.7e-33 146.0 169 46.7
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 4.7e-33 145.2 167 44.3
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 4.7e-33 145.2 169 46.7
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 7.9e-33 144.4 163 46.6
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 1.0e-32 144.1 162 44.4
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 1.8e-32 143.3 169 43.2
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 2.3e-32 142.9 173 39.9
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 2.3e-32 142.9 170 45.9
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 3.0e-32 142.5 170 45.9
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 5.1e-32 141.7 171 40.9
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 8.8e-32 141.0 172 45.9
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 1.5e-31 140.2 162 43.2
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 2.6e-31 139.4 162 43.2
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 4.4e-31 138.7 172 44.8
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 5.7e-31 138.3 171 45.0
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 9.7e-31 137.5 172 44.8
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.7e-30 136.7 172 44.8
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.7e-30 136.7 172 44.8
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 2.2e-30 136.3 204 38.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 2.8e-30 136.0 162 42.6
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 3.7e-30 135.6 157 45.2
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 3.7e-30 135.6 157 45.2
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-30 135.2 169 42.0
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 4.8e-30 135.2 168 42.9
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.1e-29 134.0 170 41.2
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 1.8e-29 133.3 173 42.2
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 1.8e-29 133.3 156 42.3
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 4.1e-29 132.1 168 43.5
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 4.1e-29 132.1 168 42.3
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 1.2e-28 130.6 170 41.2
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.2e-28 130.6 168 41.1
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.5e-28 130.2 169 43.2
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 4.5e-28 128.6 128 50.0
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 2.2e-27 126.3 148 43.2
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 2.2e-27 126.3 153 42.5
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 2.2e-27 126.3 170 41.2
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 1.5e-26 123.6 167 37.7
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.2e-25 120.6 170 40.6
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 2.1e-25 119.8 161 40.4
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 6.1e-25 118.2 165 38.8
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 7.5e-23 111.3 162 38.3
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 9.1e-21 104.4 142 38.7
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-20 102.1 167 36.5
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 4.5e-20 102.1 184 35.9
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 1.0e-19 100.9 184 36.4
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.7e-19 100.1 109 44.0
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 7.2e-18 94.7 187 38.0
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 7.2e-18 94.7 106 42.5
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 4.7e-17 92.0 187 38.0
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 4.7e-17 92.0 125 40.0
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-16 90.9 188 36.7
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-16 90.5 186 29.6
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 4.0e-16 89.0 184 33.2
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 5.2e-16 88.6 139 36.7
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.5e-15 87.0 168 31.0
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-15 86.3 167 37.1
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-15 85.9 179 33.5
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 1.3e-14 84.0 116 36.2
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-14 83.6 176 32.4
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-14 82.0 176 36.4
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-14 81.6 138 31.9
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 3.1e-13 79.3 121 35.5
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 5.4e-13 78.6 115 44.3
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 7.0e-13 78.2 157 28.7
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-12 77.4 181 32.0
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-12 76.3 174 27.6
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 3.5e-12 75.9 74 52.7
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 2.2e-11 73.2 158 27.2
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 3.8e-11 72.4 161 28.0
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 6.5e-11 71.6 73 58.9
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 3.2e-10 69.3 73 50.7
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 9.4e-10 67.8 76 39.5
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-09 67.4 122 32.8
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-09 66.2 175 29.1
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 6.1e-09 65.1 175 31.4
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-08 63.2 138 31.9
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-07 58.5 140 28.6
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 5.7e-07 58.5 129 34.1
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 9.8e-07 57.8 183 26.2
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-06 57.4 130 29.2
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-06 55.8 133 30.8


User provided reference genes

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