Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 5.1e-122 441.0 217 100.0
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.7e-88 329.7 217 74.2
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.4e-79 299.3 215 69.8
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 8.6e-69 264.2 217 62.2
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 5.6e-68 261.5 218 61.9
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 2.8e-67 259.2 218 61.9
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 3.6e-67 258.8 218 61.5
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.4e-66 256.9 217 60.4
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 8.9e-66 254.2 218 60.1
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.2e-65 253.8 195 63.6
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.5e-65 253.4 218 58.3
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 1.7e-64 250.0 217 59.0
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 2.9e-64 249.2 218 58.3
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 2.4e-63 246.1 157 72.0
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.4e-63 246.1 218 56.4
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.2e-63 245.7 220 57.3
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 4.1e-63 245.4 221 56.1
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.1e-63 245.4 218 56.9
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 7.1e-63 244.6 218 56.4
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.2e-62 243.8 219 58.0
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.6e-62 243.4 217 57.1
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.6e-62 243.4 217 57.1
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 2.1e-62 243.0 217 59.0
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 3.5e-62 242.3 219 58.9
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 3.5e-62 242.3 159 67.3
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 4.6e-62 241.9 219 57.5
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 4.6e-62 241.9 225 56.4
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.0e-61 240.7 219 58.4
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 1.0e-61 240.7 221 56.6
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 2.3e-61 239.6 219 57.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 2.3e-61 239.6 222 56.8
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 2.3e-61 239.6 226 55.3
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.3e-61 239.6 212 56.6
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.0e-61 239.2 219 57.1
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 3.0e-61 239.2 217 59.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 5.1e-61 238.4 220 55.5
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 5.1e-61 238.4 230 54.3
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 5.1e-61 238.4 222 57.7
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.9e-60 236.5 162 63.6
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 1.9e-60 236.5 219 55.3
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 3.3e-60 235.7 218 56.0
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 3.3e-60 235.7 219 55.3
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 4.3e-60 235.3 218 56.9
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 5.6e-60 235.0 218 56.9
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.6e-60 235.0 217 58.5
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 9.6e-60 234.2 222 54.5
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.2e-59 233.8 217 56.2
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.6e-59 233.4 217 53.5
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.6e-59 233.4 218 56.4
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.6e-59 233.4 222 57.2
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.6e-59 233.4 218 56.4
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.8e-59 232.6 218 54.1
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 3.6e-59 232.3 218 52.3
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 8.1e-59 231.1 217 53.9
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 8.1e-59 231.1 217 53.9
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.1e-58 230.7 219 54.8
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.1e-58 230.7 164 65.9
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 1.1e-58 230.7 226 54.0
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.4e-58 229.6 137 75.9
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 2.4e-58 229.6 157 67.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 3.1e-58 229.2 221 53.4
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 4.0e-58 228.8 224 53.1
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 6.9e-58 228.0 160 65.6
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 6.9e-58 228.0 223 52.5
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 2.0e-57 226.5 217 53.9
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 2.6e-57 226.1 161 64.6
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 5.8e-57 224.9 218 54.1
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.7e-56 223.4 230 53.5
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 2.2e-56 223.0 218 53.2
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.1e-55 220.7 211 56.4
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.9e-55 219.9 205 57.6
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.9e-55 219.9 223 52.5
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 2.4e-55 219.5 219 56.2
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 5.4e-55 218.4 222 51.8
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 9.3e-55 217.6 219 55.7
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.2e-54 217.2 190 56.3
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.6e-54 216.9 168 63.1
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 2.7e-54 216.1 227 54.2
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.7e-54 216.1 220 55.5
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 1.0e-53 214.2 218 55.0
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.3e-53 213.8 219 55.3
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.3e-53 213.8 219 55.3
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.7e-53 213.4 219 53.4
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 3.9e-53 212.2 227 53.3
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 5.1e-53 211.8 158 58.9
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 8.7e-53 211.1 224 54.9
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 7.3e-52 208.0 141 68.8
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 2.4e-50 203.0 173 57.2
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 4.5e-49 198.7 219 49.8
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 8.7e-45 184.5 123 69.1
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 5.6e-44 181.8 173 49.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.8e-43 179.5 150 55.3
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 9.0e-42 174.5 162 48.1
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 4.9e-40 168.7 134 53.0
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 2.1e-38 163.3 143 50.3
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 3.7e-35 152.5 165 44.2
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 5.3e-34 148.7 126 57.1
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.9e-31 140.2 104 62.5
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 1.0e-29 134.4 167 41.3
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 6.9e-26 121.7 148 38.5
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.0e-25 120.2 79 68.4
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.2e-22 110.9 148 43.9
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.6e-22 109.0 139 44.6
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 2.3e-21 106.7 149 40.3
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 6.3e-19 98.6 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 7.2e-15 85.1 54 75.9
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.5e-12 77.4 44 77.3


User provided reference genes

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