Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 3.2e-170 601.7 303 100.0
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 2.8e-150 535.4 303 88.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 2.4e-141 505.8 302 82.5
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 3.4e-140 501.9 301 81.4
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.7e-139 499.6 303 80.9
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 3.8e-139 498.4 301 80.4
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.4e-138 496.5 299 80.6
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.9e-138 496.1 303 79.2
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 79.1
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 4.2e-138 495.0 303 79.9
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 5.5e-138 494.6 303 78.5
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.2e-137 493.4 302 80.1
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.2e-137 493.4 303 79.2
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 78.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 78.5
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 77.9
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 77.9
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 79.9
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 78.5
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.0e-136 488.8 301 77.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 77.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 77.9
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.9e-136 488.4 301 79.1
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 77.6
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.1e-135 486.9 301 79.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.5e-135 486.5 303 77.6
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 4.3e-135 485.0 301 78.1
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 7.4e-135 484.2 303 78.2
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 9.7e-135 483.8 303 78.2
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 78.1
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 2.2e-134 482.6 301 77.1
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.8e-134 482.3 299 78.3
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.8e-134 482.3 301 78.1
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.1e-133 480.3 303 76.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 76.6
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 75.9
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.8e-133 479.6 303 77.6
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.1e-133 478.8 301 77.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 9.1e-133 477.2 303 76.6
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 76.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 76.4
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 76.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 76.9
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 7.7e-132 474.2 301 76.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.0e-131 471.5 303 75.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 6.5e-131 471.1 303 76.6
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 8.5e-131 470.7 303 76.9
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 76.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 75.6
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 75.2
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 2.5e-130 469.2 303 75.6
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.2e-130 468.8 295 76.3
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 4.2e-130 468.4 299 75.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.6e-129 466.5 303 74.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.1e-129 466.1 301 75.4
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.1e-129 466.1 301 74.4
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 3.6e-129 465.3 300 75.0
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.7e-128 461.1 301 74.4
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.2e-126 456.1 303 74.9
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 4.8e-126 454.9 293 76.5
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.4e-125 452.6 305 74.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 4.1e-125 451.8 249 89.6
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 4.1e-125 451.8 301 73.4
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 5.9e-124 448.0 303 74.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 7.7e-124 447.6 301 73.1
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 7.7e-124 447.6 303 71.6
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 8.5e-123 444.1 300 72.0
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.4e-122 443.4 301 70.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 3.2e-122 442.2 306 71.9
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.6e-121 439.9 300 71.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.7e-121 439.1 311 70.4
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 4.7e-121 438.3 300 71.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 70.7
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 2.3e-120 436.0 306 72.5
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 69.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.2e-120 434.9 300 71.0
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.2e-120 434.9 305 71.8
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.5e-119 433.3 300 70.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.6e-119 432.6 300 69.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.4e-119 431.8 300 70.7
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.4e-119 431.8 300 70.7
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 7.4e-119 431.0 306 71.6
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 9.7e-119 430.6 300 70.3
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 68.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 3.7e-118 428.7 306 70.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 4.8e-118 428.3 287 72.5
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 70.3
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 6.3e-118 427.9 300 70.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.4e-117 426.0 300 70.3
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 3.1e-117 425.6 305 72.5
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.2e-116 423.7 303 69.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.6e-116 422.5 275 75.6
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 5.9e-116 421.4 300 68.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 5.9e-116 421.4 300 68.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 5.9e-116 421.4 300 68.7
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.7e-115 419.9 301 67.1
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 5.5e-114 414.8 251 79.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.7e-103 378.3 261 71.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.7e-102 376.7 234 77.8
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.8e-102 375.9 299 63.2
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 7.0e-101 371.3 302 62.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 4.2e-98 362.1 225 76.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.1e-97 359.8 221 76.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.8e-97 359.4 249 69.1
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.8e-96 354.4 225 73.8
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 4.4e-95 352.1 215 76.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 3.1e-93 345.9 235 71.1
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 3.1e-93 345.9 302 57.6
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.7e-91 340.1 219 76.3
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.5e-90 337.0 255 65.9
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 3.2e-85 319.3 277 58.1
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 4.7e-81 305.4 301 54.8
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.3e-78 297.4 340 50.6
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 5.2e-72 275.4 173 74.0
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.4e-56 223.4 312 41.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-50 204.5 163 67.5
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 8.4e-46 188.3 163 59.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.4e-40 171.0 303 38.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.4e-40 170.2 343 33.8
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 9.9e-39 164.9 177 48.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.2e-38 163.7 105 78.1
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 7.4e-34 148.7 91 79.1
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.2e-31 141.4 94 78.7
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.2e-30 137.1 88 68.2
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.2e-25 120.6 351 29.6
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.8e-24 117.5 86 70.9
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.5e-23 114.4 72 72.2
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 7.6e-23 112.1 120 52.5
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.2e-17 94.0 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.4e-15 86.7 67 53.7
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.1e-13 81.6 46 82.6


User provided reference genes

Program Settings