Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 9.7e-65 250.0 125 100.0
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 2.8e-56 221.9 124 90.3
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 9.1e-55 216.9 125 88.0
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 3.8e-53 211.5 125 86.4
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 6.5e-53 210.7 123 83.7
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.5e-52 209.5 125 82.4
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 1.5e-52 209.5 125 82.4
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 1.5e-52 209.5 125 83.2
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 9.4e-52 206.8 125 82.4
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.6e-51 206.1 125 81.6
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.6e-51 206.1 125 81.6
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 2.7e-51 205.3 125 81.6
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 4.7e-51 204.5 125 79.2
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 6.1e-51 204.1 125 80.0
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 8.8e-50 200.3 125 78.4
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 2.0e-49 199.1 123 76.4
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 2.6e-49 198.7 125 78.4
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 2.6e-49 198.7 125 77.6
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 5.7e-49 197.6 122 79.5
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 9.7e-49 196.8 120 79.2
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 9.7e-49 196.8 124 77.4
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 1.3e-48 196.4 125 77.6
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 1.7e-48 196.1 123 77.2
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 1.7e-48 196.1 123 77.2
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.2e-48 195.7 123 78.0
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 2.2e-48 195.7 120 79.2
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 3.7e-48 194.9 125 76.8
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 3.7e-48 194.9 122 78.7
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 4.8e-48 194.5 123 76.4
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 4.8e-48 194.5 123 77.2
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 4.8e-48 194.5 123 76.4
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 6.3e-48 194.1 124 77.4
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 6.3e-48 194.1 124 77.4
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 6.3e-48 194.1 125 76.0
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 8.2e-48 193.7 125 78.4
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 8.2e-48 193.7 125 76.0
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 1.1e-47 193.4 123 78.0
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 1.1e-47 193.4 125 76.8
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 1.1e-47 193.4 125 75.2
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.4e-47 193.0 123 76.4
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.4e-47 193.0 123 76.4
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.4e-47 193.0 125 76.8
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 3.1e-47 191.8 125 76.0
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 5.3e-47 191.0 125 76.0
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 5.3e-47 191.0 125 75.2
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 7.0e-47 190.7 123 76.4
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 7.0e-47 190.7 122 74.6
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 9.1e-47 190.3 123 75.6
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 9.1e-47 190.3 120 77.5
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 9.1e-47 190.3 125 80.0
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 1.2e-46 189.9 123 77.2
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 2.0e-46 189.1 119 77.3
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 2.7e-46 188.7 125 79.2
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 4.5e-46 188.0 125 73.6
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 5.9e-46 187.6 124 75.8
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 5.9e-46 187.6 125 74.4
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 5.9e-46 187.6 123 76.4
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 1.0e-45 186.8 125 75.2
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 1.0e-45 186.8 123 74.0
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 1.0e-45 186.8 125 73.6
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 1.7e-45 186.0 125 75.2
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 2.2e-45 185.7 125 76.0
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 2.2e-45 185.7 125 73.6
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 2.2e-45 185.7 123 73.2
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 2.9e-45 185.3 155 63.2
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 2.9e-45 185.3 125 73.6
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 2.9e-45 185.3 125 72.8
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 5.0e-45 184.5 123 74.0
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 5.0e-45 184.5 120 75.0
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 6.5e-45 184.1 122 74.6
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 6.5e-45 184.1 119 73.9
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 8.5e-45 183.7 124 72.6
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 1.1e-44 183.3 123 73.2
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.1e-44 183.3 123 73.2
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 1.5e-44 183.0 123 73.2
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 1.5e-44 183.0 123 73.2
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 1.5e-44 183.0 123 73.2
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 1.5e-44 183.0 123 73.2
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 1.5e-44 183.0 123 73.2
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.5e-44 183.0 119 74.8
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 2.5e-44 182.2 123 73.2
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 2.5e-44 182.2 120 74.2
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 2.5e-44 182.2 123 73.2
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 3.2e-44 181.8 123 72.4
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.2e-44 181.8 123 73.2
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 4.2e-44 181.4 120 75.0
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 4.2e-44 181.4 120 75.0
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 5.5e-44 181.0 120 74.2
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 7.2e-44 180.6 125 72.8
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 7.2e-44 180.6 123 72.4
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 2.7e-43 178.7 125 71.2
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 3.6e-43 178.3 110 78.2
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.7e-43 177.9 123 70.7
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 8.0e-43 177.2 124 69.4
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 3.0e-42 175.3 119 68.9
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 5.2e-42 174.5 124 66.1
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 6.8e-42 174.1 109 77.1
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 6.8e-42 174.1 120 72.5
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 6.8e-42 174.1 120 72.5
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 6.8e-42 174.1 125 66.4
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 8.8e-42 173.7 123 69.1
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 3.4e-41 171.8 124 66.9
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 3.4e-41 171.8 123 68.3
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 4.4e-41 171.4 124 70.2
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 4.4e-41 171.4 125 69.6
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 7.5e-41 170.6 124 66.1
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 9.8e-41 170.2 125 66.4
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.3e-40 169.9 124 71.0
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 1.3e-40 169.9 125 66.4
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.7e-40 169.5 125 69.6
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.4e-39 166.4 125 68.0
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 3.1e-39 165.2 125 64.8
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 1.6e-38 162.9 123 63.4
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 2.7e-38 162.2 120 65.0
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 7.7e-38 160.6 123 62.6
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 1.0e-37 160.2 130 59.2
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 3.8e-37 158.3 123 66.7
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.1e-36 156.8 123 68.3
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.1e-36 156.8 123 68.3
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 1.8e-34 149.4 97 75.3
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 2.3e-34 149.1 120 59.2
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 3.0e-34 148.7 120 59.2
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 4.0e-34 148.3 107 71.0
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 7.5e-33 144.1 124 62.9
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 1.3e-32 143.3 105 67.6
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 3.7e-32 141.7 120 59.2
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 7.0e-31 137.5 121 56.2
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 7.8e-30 134.0 110 63.6
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 1.7e-29 132.9 123 58.5
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 1.0e-26 123.6 90 66.7
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.4e-26 123.2 82 72.0
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 2.6e-25 119.0 120 48.3
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 4.9e-24 114.8 118 53.4
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 4.1e-23 111.7 83 68.7
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 5.4e-23 111.3 62 85.5
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 9.2e-23 110.5 125 50.4
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 1.2e-22 110.2 123 52.8
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 1.6e-22 109.8 82 69.5
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 1.1e-20 103.6 60 81.7
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 1.1e-20 103.6 83 61.4
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 3.6e-19 98.6 100 55.0
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 4.7e-19 98.2 69 69.6
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.9e-16 89.0 92 53.3
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 9.2e-15 84.0 79 60.8
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 2.1e-14 82.8 63 63.5
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 7.3e-12 74.3 103 46.6
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 3.1e-10 68.9 107 39.3
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 9.9e-09 63.9 43 69.8
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 2.1e-06 56.2 107 34.6
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 2.7e-06 55.8 88 38.6
CBR_g37451 Chara braunii HOM05D004883 ORTHO05D005766 3.5e-06 55.5 54 55.6


User provided reference genes

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