Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.2e-137 492.3 244 100.0
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 2.2e-113 412.5 239 86.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 2.2e-113 412.5 239 83.7
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 5.8e-106 387.9 237 80.6
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 5.8e-106 387.9 237 79.3
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 9.9e-106 387.1 237 78.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.2e-105 386.0 237 78.5
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 2.9e-105 385.6 239 79.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.9e-105 384.8 237 78.5
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 8.4e-105 384.0 237 78.1
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 5.4e-104 381.3 237 76.8
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 9.3e-104 380.6 224 82.6
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.2e-103 380.2 237 78.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.6e-103 379.8 224 82.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 2.7e-103 379.0 237 79.3
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 7.9e-103 377.5 224 81.2
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 7.9e-103 377.5 224 81.2
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 7.9e-103 377.5 224 81.2
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.3e-102 376.7 237 78.5
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.8e-102 376.3 237 78.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 2.3e-102 375.9 231 81.0
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 5.1e-102 374.8 237 75.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 5.1e-102 374.8 224 80.8
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.5e-101 373.2 237 78.1
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.5e-101 372.5 234 79.1
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.5e-101 372.5 224 80.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.3e-101 371.7 237 75.9
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 4.3e-101 371.7 237 76.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 7.4e-101 370.9 229 79.5
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 7.4e-101 370.9 224 80.4
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 9.6e-101 370.5 230 77.4
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.6e-100 369.8 230 77.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.7e-100 368.6 224 76.8
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.2e-100 367.9 224 77.2
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 8.1e-100 367.5 237 73.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.4e-99 366.7 224 77.7
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.8e-99 366.3 224 78.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 5.3e-99 364.8 242 74.4
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 6.9e-99 364.4 224 78.1
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 6.9e-99 364.4 230 76.5
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 9.0e-99 364.0 224 78.6
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.5e-98 363.2 224 79.0
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 2.6e-98 362.5 224 77.2
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 2.6e-98 362.5 237 74.7
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 2.6e-98 362.5 267 68.5
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 3.4e-98 362.1 224 78.6
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 3.4e-98 362.1 224 76.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 4.5e-98 361.7 233 74.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 5.8e-98 361.3 239 73.2
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 9.9e-98 360.5 224 77.7
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.3e-97 360.1 237 76.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 2.2e-97 359.4 223 77.6
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 2.2e-97 359.4 245 71.8
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 3.8e-97 358.6 259 71.0
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.1e-96 357.1 224 76.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 1.9e-96 356.3 218 78.9
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.2e-96 355.5 224 76.8
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.2e-96 355.5 224 76.3
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 3.2e-96 355.5 224 76.3
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 9.3e-96 354.0 224 75.9
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 9.3e-96 354.0 224 75.9
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.2e-95 353.6 223 76.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.1e-95 352.8 225 73.3
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.7e-95 352.4 228 76.8
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.0e-94 350.5 224 74.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.0e-94 350.5 224 74.6
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.3e-94 350.1 231 73.2
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 3.0e-94 349.0 224 74.1
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.1e-94 348.2 224 74.1
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 5.1e-94 348.2 234 73.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.9e-93 346.3 234 72.2
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 5.6e-93 344.7 224 73.2
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.7e-92 342.0 247 69.6
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.8e-92 341.7 237 72.2
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 5.3e-91 338.2 237 68.4
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.5e-90 335.1 224 70.5
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.3e-89 333.6 237 71.7
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.8e-89 332.0 226 69.5
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.2e-88 328.6 224 72.8
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.2e-87 327.0 198 80.3
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.6e-87 326.6 230 67.8
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.6e-87 326.6 230 66.5
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.6e-87 325.1 230 67.4
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.0e-86 323.9 247 64.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.3e-86 323.6 272 62.5
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.3e-86 322.8 199 80.4
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-83 313.9 252 61.9
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 6.9e-83 311.2 230 66.5
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.4e-82 308.9 261 59.4
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.9e-77 293.1 190 74.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.4e-77 291.2 273 60.4
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 9.7e-77 290.8 190 77.4
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 4.8e-76 288.5 237 64.6
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.8e-75 286.6 228 60.5
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 3.1e-75 285.8 219 62.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.5e-74 283.5 221 64.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.5e-74 283.5 189 72.5
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 7.7e-74 281.2 214 68.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 7.2e-72 274.6 295 50.8
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.9e-71 271.2 163 81.0
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 3.7e-68 262.3 189 71.4
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 4.7e-63 245.4 232 51.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 8.8e-62 241.1 220 53.2
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-60 237.3 221 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.1e-59 234.2 220 52.7
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 9.1e-59 231.1 154 70.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.6e-58 229.6 189 65.6
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 4.5e-58 228.8 148 74.3
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 4.5e-58 228.8 148 74.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.9e-57 226.1 181 64.6
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.2e-52 209.9 229 46.7
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.7e-44 182.6 117 76.1
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 6.1e-39 165.2 128 64.8
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.0e-37 160.2 161 54.7
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 7.3e-32 141.7 116 64.7
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-31 139.8 91 75.8
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.0e-25 121.3 91 65.9
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.5e-24 117.5 81 69.1
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.5e-24 116.7 71 74.6
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.4e-22 110.9 61 83.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 4.4e-21 105.9 55 85.5
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.9e-19 100.5 104 58.7
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.6e-15 86.3 161 32.3
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.7e-12 77.4 65 61.5
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.6e-07 60.8 65 46.2


User provided reference genes

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