Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1679 Erigeron canadensis HOM05D003776 ORTHO05D004459 2.1e-149 532.3 265 100.0
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 2.0e-35 153.7 147 61.2
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 5.8e-35 152.1 147 59.2
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 2.2e-34 150.2 147 59.2
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 1.1e-30 137.9 169 49.7
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.9e-30 137.1 147 53.7
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 1.9e-30 137.1 147 52.4
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 1.9e-30 137.1 147 52.4
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 3.3e-30 136.3 147 53.7
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 4.3e-30 136.0 150 52.7
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 9.6e-30 134.8 147 53.7
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 1.6e-29 134.0 147 52.4
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 1.6e-29 134.0 147 52.4
Cpa.g.sc75.31 Carica papaya HOM05D003776 ORTHO05D004459 2.8e-29 133.3 144 53.5
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 2.8e-29 133.3 144 52.1
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.8e-29 133.3 169 47.3
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 2.8e-29 133.3 150 51.3
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 2.8e-29 133.3 150 51.3
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 3.7e-29 132.9 169 47.3
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 6.2e-29 132.1 150 51.3
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 1.1e-28 131.3 147 50.3
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.1e-28 131.3 147 51.7
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 1.4e-28 131.0 146 52.1
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 2.4e-28 130.2 144 52.1
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 3.1e-28 129.8 147 52.4
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 3.1e-28 129.8 146 51.4
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 3.1e-28 129.8 173 45.7
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 3.1e-28 129.8 147 50.3
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 3.1e-28 129.8 147 51.7
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 4.0e-28 129.4 147 50.3
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 5.3e-28 129.0 147 50.3
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 5.3e-28 129.0 147 50.3
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 6.9e-28 128.6 147 50.3
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 6.9e-28 128.6 144 51.4
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 6.9e-28 128.6 147 50.3
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 6.9e-28 128.6 147 48.3
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 9.0e-28 128.3 147 51.0
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 9.0e-28 128.3 147 50.3
Hma1.2p1_0018F.1_g012440 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 1.2e-27 127.9 147 51.7
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.0e-27 127.1 169 45.0
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 2.0e-27 127.1 147 51.0
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.0e-27 127.1 225 39.1
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 2.6e-27 126.7 147 50.3
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 3.4e-27 126.3 133 51.9
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 4.5e-27 125.9 164 45.7
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 4.5e-27 125.9 140 52.1
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 5.8e-27 125.6 147 50.3
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 7.6e-27 125.2 147 49.7
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 7.6e-27 125.2 147 49.0
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 1.3e-26 124.4 140 50.7
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 2.2e-26 123.6 169 47.3
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 2.9e-26 123.2 140 50.7
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 3.8e-26 122.9 147 50.3
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 5.0e-26 122.5 147 49.0
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 6.5e-26 122.1 151 48.3
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 8.4e-26 121.7 144 47.9
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 1.1e-25 121.3 144 47.9
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 1.1e-25 121.3 147 48.3
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 1.9e-25 120.6 140 50.7
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 7.1e-25 118.6 147 47.6
Duzib187G1323 Durio zibethinus HOM05D003776 ORTHO05D004459 9.3e-25 118.2 151 47.7
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 9.3e-25 118.2 151 48.3
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 9.3e-25 118.2 147 48.3
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.6e-24 117.5 147 47.6
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 4.6e-24 115.9 148 45.3
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.3e-23 114.4 147 46.9
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 2.3e-23 113.6 174 40.8
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 3.0e-23 113.2 151 46.4
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 3.9e-23 112.8 147 46.3
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 3.9e-23 112.8 147 46.3
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 3.9e-23 112.8 147 46.3
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 5.1e-23 112.5 147 46.3
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 1.1e-22 111.3 152 46.7
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 2.5e-22 110.2 147 46.3
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 2.5e-22 110.2 147 46.3
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 5.7e-22 109.0 147 45.6
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 7.4e-22 108.6 147 45.6
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 7.4e-22 108.6 147 44.9
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 9.7e-22 108.2 147 45.6
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 1.3e-21 107.8 148 42.6
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 2.2e-21 107.1 147 45.6
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 2.8e-21 106.7 147 44.9
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 3.7e-21 106.3 147 44.9
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 3.7e-21 106.3 147 44.9
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 3.7e-21 106.3 147 44.9
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 3.7e-21 106.3 147 44.9
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 4.8e-21 105.9 117 48.7
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 1.4e-20 104.4 140 45.0
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 2.4e-20 103.6 147 42.9
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 2.6e-19 100.1 147 42.9
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 3.4e-19 99.8 130 41.5
SEGI_34338 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 7.7e-19 98.6 159 37.7
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 1.2e-16 91.3 62 69.4
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 1.2e-16 91.3 150 37.3
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 7.9e-16 88.6 245 28.6
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 1.5e-14 84.3 118 45.8
Psat0s1308g0040 Pisum sativum HOM05D002636 ORTHO05D004459 1.3e-13 81.3 69 59.4
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 3.1e-12 76.6 134 38.8
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 3.1e-12 76.6 134 38.8
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 4.1e-12 76.3 146 34.2
Psat5g250280 Pisum sativum HOM05D003776 ORTHO05D004459 5.3e-12 75.9 61 63.9
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 1.2e-11 74.7 143 35.0
Pp3c23_3420 Physcomitrium patens HOM05D003776 ORTHO05D004459 1.3e-10 71.2 129 32.6
Psat0s3979g0040 Pisum sativum HOM05D003776 ORTHO05D004459 1.3e-10 71.2 147 35.4
Pp3c20_13260 Physcomitrium patens HOM05D003776 ORTHO05D004459 5.0e-10 69.3 131 32.8
FvH4_6g38790 Fragaria vesca HOM05D003776 ORTHO05D004459 2.5e-09 67.0 114 40.4


User provided reference genes

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