Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 0.0e+00 1112.4 605 100.0
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 3.3e-219 765.4 629 70.6
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 6.8e-180 634.8 468 70.9
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 7.5e-179 631.3 447 73.6
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 3.1e-177 625.9 510 65.1
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 1.2e-176 624.0 458 71.6
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 2.0e-176 623.2 468 69.7
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.5e-176 622.5 385 80.8
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 5.9e-176 621.7 606 58.7
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 7.7e-176 621.3 628 56.5
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 7.7e-176 621.3 622 59.5
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.0e-175 620.9 419 74.2
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 6.6e-175 618.2 613 57.4
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 6.6e-175 618.2 612 58.0
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.6e-175 617.8 519 64.7
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 5.6e-174 615.1 414 76.3
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 5.6e-174 615.1 477 69.2
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 9.5e-174 614.4 602 58.3
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.1e-173 613.2 407 76.4
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.1e-173 613.2 427 72.4
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.8e-173 612.8 615 58.4
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.0e-172 610.9 479 66.8
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 4.0e-172 609.0 596 59.9
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 2.0e-171 606.7 427 72.4
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 3.4e-171 605.9 416 72.8
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 4.4e-171 605.5 605 57.4
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 7.5e-171 604.7 457 68.5
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 9.8e-171 604.4 616 57.0
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.7e-170 602.4 510 63.3
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 3.7e-170 602.4 601 59.6
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 1.8e-169 600.1 417 71.9
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 5.4e-169 598.6 623 55.4
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 7.0e-169 598.2 419 71.8
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 7.0e-169 598.2 466 67.4
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 9.2e-169 597.8 425 70.6
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.2e-168 597.4 421 71.3
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.7e-168 596.3 506 62.5
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 3.0e-167 592.8 600 58.8
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 3.9e-167 592.4 502 62.9
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-166 590.5 493 63.7
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 3.3e-166 589.3 639 54.0
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 7.3e-166 588.2 605 57.9
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 9.5e-166 587.8 526 60.5
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.2e-165 587.4 510 62.9
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.6e-165 587.0 521 62.8
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 4.7e-165 585.5 677 52.9
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 4.0e-164 582.4 623 53.8
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.8e-164 581.6 407 72.2
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 2.0e-163 580.1 611 57.4
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 2.6e-163 579.7 624 55.3
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 5.8e-163 578.6 640 54.4
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 7.5e-163 578.2 449 68.2
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-162 577.4 471 65.2
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 2.9e-162 576.2 471 65.2
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 1.9e-161 573.5 420 69.3
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 3.2e-161 572.8 379 76.5
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 5.4e-161 572.0 625 52.6
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.7e-160 569.7 531 58.0
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 1.5e-158 563.9 625 56.5
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 4.7e-157 558.9 628 54.3
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.7e-157 558.9 428 68.0
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-156 557.8 428 68.0
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 4.0e-156 555.8 520 59.2
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 4.4e-155 552.4 424 67.0
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 7.5e-155 551.6 449 63.9
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 6.4e-154 548.5 633 53.7
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 1.1e-153 547.7 420 63.8
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 5.4e-153 545.4 598 55.4
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 7.1e-153 545.0 424 65.3
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 2.1e-152 543.5 392 70.4
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 4.6e-152 542.3 560 57.7
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 4.3e-150 535.8 425 64.7
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 4.7e-149 532.3 524 58.4
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 1.4e-148 530.8 421 66.7
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 2.3e-148 530.0 407 67.1
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 4.0e-148 529.3 584 54.5
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 4.1e-145 519.2 613 52.2
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.6e-144 517.3 474 58.9
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 1.6e-144 517.3 619 52.3
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 6.6e-143 511.9 418 62.2
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 8.6e-143 511.5 639 51.5
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 2.6e-139 500.0 384 67.7
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 5.8e-139 498.8 391 65.5
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 3.2e-137 493.0 451 58.1
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 1.8e-132 477.2 471 56.3
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 3.4e-131 473.0 402 61.9
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.4e-129 467.6 466 56.7
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 5.4e-129 465.7 398 60.6
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 4.6e-128 462.6 353 66.0
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 1.8e-127 460.7 347 68.3
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 3.3e-126 456.4 342 67.5
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 4.8e-125 452.6 472 54.7
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 4.8e-125 452.6 604 50.2
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 6.7e-119 432.2 425 55.5
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 2.8e-117 426.8 426 67.1
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 1.8e-116 424.1 264 80.3
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 7.6e-115 418.7 381 55.9
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 2.7e-112 410.2 391 56.8
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 3.5e-112 409.8 382 58.1
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 1.3e-109 401.4 403 49.9
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 4.6e-104 382.9 398 52.5
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 5.7e-102 375.9 336 61.3
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 7.4e-102 375.6 324 63.6
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 9.7e-102 375.2 398 51.8
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.7e-101 374.4 478 50.6
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.4e-100 371.3 734 39.4
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 9.1e-100 368.6 363 58.1
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 4.4e-86 323.2 391 50.1
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 1.0e-82 312.0 422 48.6
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.5e-82 309.3 417 43.9
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 1.9e-81 307.8 318 50.3
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 2.5e-81 307.4 408 50.5
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.2e-80 305.1 424 48.1
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 7.7e-75 285.8 270 58.1
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.2e-70 271.9 171 77.8
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 5.7e-70 269.6 242 57.9
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 1.0e-66 258.8 348 45.1
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 7.2e-65 252.7 149 87.2
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.2e-64 251.9 298 50.0
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.5e-62 245.0 394 43.4
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 1.1e-60 238.8 187 67.9
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 7.0e-60 236.1 141 80.9
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 3.8e-58 230.3 146 76.0
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 2.9e-53 214.2 164 64.0
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 7.0e-52 209.5 139 74.1
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.2e-51 208.8 329 45.3
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 6.2e-48 196.4 126 77.0
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 3.2e-44 184.1 383 32.6
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 2.1e-43 181.4 403 33.7
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.7e-43 181.0 142 67.6
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-41 175.3 178 56.2
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 5.6e-41 173.3 171 60.8
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.3e-39 167.9 144 64.6
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 7.5e-38 162.9 126 66.7
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.2e-37 161.4 120 70.8
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.1e-36 159.1 333 43.2
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 1.0e-34 152.5 99 73.7
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 1.7e-34 151.8 136 61.0
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 9.9e-30 136.0 238 36.6
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 9.9e-30 136.0 238 36.6
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 2.9e-29 134.4 279 30.1
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 6.4e-29 133.3 87 78.2
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 3.5e-27 127.5 171 43.3
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 4.0e-23 114.0 284 32.7
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 5.8e-22 110.2 68 82.4
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.1e-20 105.9 117 47.9
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 3.2e-20 104.4 177 41.2
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.1e-18 97.1 92 55.4
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.1e-18 97.1 92 55.4
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 5.1e-18 97.1 92 55.4
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 5.1e-18 97.1 92 55.4
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 3.3e-17 94.4 82 64.6
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 7.3e-17 93.2 84 58.3
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 6.2e-16 90.1 84 56.0
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.4e-15 89.0 54 83.3
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 3.2e-12 77.8 75 54.7
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 7.1e-12 76.6 147 36.1
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.2e-11 75.9 52 76.9
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 1.2e-11 75.9 55 61.8
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.0e-10 72.8 50 62.0
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 2.3e-10 71.6 53 69.8
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 2.3e-10 71.6 149 30.9
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 1.5e-09 68.9 52 69.2
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 3.3e-09 67.8 40 85.0
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.3e-08 65.9 46 56.5
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.3e-08 65.9 46 56.5
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 1.6e-08 65.5 36 80.6
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.8e-08 64.7 81 43.2
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 3.7e-08 64.3 46 54.3
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 8.1e-08 63.2 52 57.7
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.1e-07 62.8 39 71.8
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 1.8e-07 62.0 52 63.5
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 4.0e-07 60.8 52 55.8


User provided reference genes

Program Settings